Biomarkers in Young Patients With Neuroblastoma
Therapeutically Applicable Research to Generate Effective Treatments (TARGET) for Neuroblastoma
RATIONALE: Studying samples of tumor tissue from patients with cancer in the laboratory may help doctors identify and learn more about biomarkers related to cancer.
PURPOSE: This research study is studying biomarkers in young patients with neuroblastoma.
調査の概要
詳細な説明
OBJECTIVES:
Primary
- To discover the therapeutically relevant driver mutations in high-risk pediatric neuroblastoma.
Secondary
- To identify a set of highly annotated neuroblastoma specimens (primary tumors and cell lines) for comprehensive genomic analyses, validation studies, resequencing efforts, and future functional assays.
- To define genome-wide DNA copy number and allelic status in at least 300 high-risk and 50 low-risk neuroblastoma primary untreated tumors, and 30 human neuroblastoma-derived cell lines.
- To define the genome-wide methylation profile of neuroblastoma in a minimum of 200 high-risk cases.
- To define the genome-wide microRNA expression profile of neuroblastoma in a minimum of 200 high-risk cases.
- To define genome-wide RNA expression signatures, including splice variations, in the same tumors and cell lines studied above.
- To identify mutations in candidate therapeutic targets using a staged resequencing strategy with ultimate genome-scale next generation resequencing of 3 genomes for 200 high-risk cases: the neuroblastoma genome and transcriptome as well as the paired constitutional genome.
- To characterize the relapsed high-risk neuroblastoma genome and epigenome.
OUTLINE: This is a multicenter study.
Previously collected samples are analyzed to define the genome-wide DNA copy number and allelic status; to define the genome-wide methylation profile of high-risk neuroblastoma cases; to define the genome-wide microRNA expression profile of high-risk neuroblastoma cases; to define the genome-wide RNA expression and relating gene expression to DNA copy number and gene polymorphisms, DNA methylation, and microRNA expression; to resequence three genomes: the neuroblastoma genome, the transcriptome, and the paired constitutional genome; and to characterize the relapsed high-risk neuroblastoma genome and epigenome.
PROJECTED ACCRUAL: A total of 300 tumor samples from patients with high-risk disease, 50 tumor samples from patients with low-risk primary neuroblastoma, and 30 human neuroblastoma-derived cell lines will be accrued for this study.
研究の種類
入学 (予想される)
参加基準
適格基準
就学可能な年齢
健康ボランティアの受け入れ
受講資格のある性別
サンプリング方法
調査対象母集団
説明
DISEASE CHARACTERISTICS:
- Registered on the COG-ANBL00B1 Neuroblastoma Biology Study or its CCG or POG precursor
Sufficient high-quality tumor material available for the proposed studies meeting the following criteria:
- Tissue histopathologic review with > 70% tumor cells in sections adjacent to areas used for nucleic acid preparation
- Matched normal cells (blood or uninvolved bone marrow) available
- ≥ 5 μg DNA available
- ≥ 5 μg RNA available
- ≥ 200 mg tissue available
Tumor samples must meet 1 of the following criteria:
High-risk tumor
- With or without MYCN amplification
- With or without tumor progression or relapse (during ≥ 2.5 years of follow up)
- Patients aged 18 months to 5 years
Low-risk tumor
- Primary neuroblastoma
- Stage I disease (completely resected)
- No event in ≥ 3 years of follow up
- Cell lines representing diverse high-risk genetics including with or without MYCN amplification and clinical course (at diagnosis or after relapse)
PATIENT CHARACTERISTICS:
- Not specified
PRIOR CONCURRENT THERAPY:
- Not specified
研究計画
研究はどのように設計されていますか？
デザインの詳細
この研究は何を測定していますか？
主要な結果の測定
結果測定 |
|---|
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Discovery of therapeutically relevant driver mutations
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二次結果の測定
結果測定 |
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Identification of a set of neuroblastoma specimens for analyses
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Genome-wide DNA copy number and allelic status
|
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Genome-wide methylation profile
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Genome-wide microRNA expression profile
|
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Genome-wide RNA expression signatures
|
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Identification of mutations in candidate therapeutic targets
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Characterization of the relapsed high-risk neuroblastoma genome and epigenome
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協力者と研究者
研究記録日
主要日程の研究
研究開始
一次修了 (実際)
研究の完了 (実際)
試験登録日
最初に提出
QC基準を満たした最初の提出物
最初の投稿 (見積もり)
学習記録の更新
投稿された最後の更新 (見積もり)
QC基準を満たした最後の更新が送信されました
最終確認日
詳しくは
本研究に関する用語
追加の関連 MeSH 用語
その他の研究ID番号
- ANBL10B1
- COG-ANBL10B1 (その他の識別子：Children's Oncology Group)
- CDR0000681912 (その他の識別子：Clinical Trials.gov)
- NCI-2011-02246 (レジストリ識別子：CTRP (Clinical Trial Reporting Program))
この情報は、Web サイト clinicaltrials.gov から変更なしで直接取得したものです。研究の詳細を変更、削除、または更新するリクエストがある場合は、register@clinicaltrials.gov。 までご連絡ください。 clinicaltrials.gov に変更が加えられるとすぐに、ウェブサイトでも自動的に更新されます。