Efficacy of the ChAdOx1 nCoV-19 Covid-19 Vaccine against the B.1.351 Variant

Shabir A Madhi, Vicky Baillie, Clare L Cutland, Merryn Voysey, Anthonet L Koen, Lee Fairlie, Sherman D Padayachee, Keertan Dheda, Shaun L Barnabas, Qasim E Bhorat, Carmen Briner, Gaurav Kwatra, Khatija Ahmed, Parvinder Aley, Sutika Bhikha, Jinal N Bhiman, As'ad E Bhorat, Jeanine du Plessis, Aliasgar Esmail, Marisa Groenewald, Elizea Horne, Shi-Hsia Hwa, Aylin Jose, Teresa Lambe, Matt Laubscher, Mookho Malahleha, Masebole Masenya, Mduduzi Masilela, Shakeel McKenzie, Kgaogelo Molapo, Andrew Moultrie, Suzette Oelofse, Faeezah Patel, Sureshnee Pillay, Sarah Rhead, Hylton Rodel, Lindie Rossouw, Carol Taoushanis, Houriiyah Tegally, Asha Thombrayil, Samuel van Eck, Constantinos K Wibmer, Nicholas M Durham, Elizabeth J Kelly, Tonya L Villafana, Sarah Gilbert, Andrew J Pollard, Tulio de Oliveira, Penny L Moore, Alex Sigal, Alane Izu, NGS-SA Group, Wits-VIDA COVID Group, Nokukhanya Mdlalose, Jennifer Giandhari, Yeshnee Naidoo, Nasreen Abrahams, Saajida Akhalwaya, Yasmeen Akhalwaya, Nabeela Bhabha, Zahedah Bhorat, Sumaiya Bhorat, Ibrahim Bhorat, Sagidi Bibi, Mustapha Bittaye, Yusuf Ahmed Bulbulia, Sandile Cele, Lynne Cornelissen, Malika Davids, Yakub Moosa Essack, Amy Flaxman, Pedro Folegatti, Suzett Fourie, Samantha H Fry, Michelle Fuskova, Yashica Ganga, Tanya Golubchik, Amina Goondiwala, Hermien Gous, Janet Grab, Johann Greffrath, Willem Hanekom, Tandile Hermanus, Adrian Hill, Catherine Hill, Laurelle Jackson, Jeanne De Jager, Shameem Jaumdally, Lisa Jose, Faeeza Kana, Simon Kerridge, Prudence Kgagudi, Alison Lawrie, Erica M Lazarus, Gila Lustig, Charlotte Mabuza, Edson Makambwa, Ross Malamatsho, Wendy Zimkhitha Mandindi, Mmatsie Manentsa, Takalani Maoko, Masego Nicole Mathibe, Hosea Matlebjane, Bella Matlonya, Kedidimetse Matshidiso, Nkululeko Mbele, Linda Mbutini, Sibongile Mncube, Nozipho Mncwango, Mapule Moloi, Lynn Morris, Lynelle Mottay, Thandeka Moyo, Lebogang Mpete, Sibekezelo Msomi, Stella Mthombeni, Sihle Mtshali, Yvonne Nkazana Mugodi, Yama Mujadidi, Christian Kabasele Mukendi, Lionel Beya Mukendi, Amit Jawaharlal Nana, Anusha Nana, Bongani Ndlovu, Ayanda Nzimande, Angela Oosthuizen, Brent Oosthuysen, Fatima Osman, Rubeshan Perumal, Sahir Yusuf Petkar, Tricia Philip, Kgomotso Phohu, Sonjia Pieterse, Annah Pitsi, Mosidi Pitsoane, Joan Du Plessis, Emma Plested, Anil Pooran, Ian Poulton, Martin Mosotho Rafuma, Aakifah Bibi Arif Sayed, Fawziyah Thompson, Bonolo Tladinyane, Michele Tomasicchio, Lara van der Merwe, Marquerit van der Merwe, Marion Watson, Peter Zuidewind, Shabir A Madhi, Vicky Baillie, Clare L Cutland, Merryn Voysey, Anthonet L Koen, Lee Fairlie, Sherman D Padayachee, Keertan Dheda, Shaun L Barnabas, Qasim E Bhorat, Carmen Briner, Gaurav Kwatra, Khatija Ahmed, Parvinder Aley, Sutika Bhikha, Jinal N Bhiman, As'ad E Bhorat, Jeanine du Plessis, Aliasgar Esmail, Marisa Groenewald, Elizea Horne, Shi-Hsia Hwa, Aylin Jose, Teresa Lambe, Matt Laubscher, Mookho Malahleha, Masebole Masenya, Mduduzi Masilela, Shakeel McKenzie, Kgaogelo Molapo, Andrew Moultrie, Suzette Oelofse, Faeezah Patel, Sureshnee Pillay, Sarah Rhead, Hylton Rodel, Lindie Rossouw, Carol Taoushanis, Houriiyah Tegally, Asha Thombrayil, Samuel van Eck, Constantinos K Wibmer, Nicholas M Durham, Elizabeth J Kelly, Tonya L Villafana, Sarah Gilbert, Andrew J Pollard, Tulio de Oliveira, Penny L Moore, Alex Sigal, Alane Izu, NGS-SA Group, Wits-VIDA COVID Group, Nokukhanya Mdlalose, Jennifer Giandhari, Yeshnee Naidoo, Nasreen Abrahams, Saajida Akhalwaya, Yasmeen Akhalwaya, Nabeela Bhabha, Zahedah Bhorat, Sumaiya Bhorat, Ibrahim Bhorat, Sagidi Bibi, Mustapha Bittaye, Yusuf Ahmed Bulbulia, Sandile Cele, Lynne Cornelissen, Malika Davids, Yakub Moosa Essack, Amy Flaxman, Pedro Folegatti, Suzett Fourie, Samantha H Fry, Michelle Fuskova, Yashica Ganga, Tanya Golubchik, Amina Goondiwala, Hermien Gous, Janet Grab, Johann Greffrath, Willem Hanekom, Tandile Hermanus, Adrian Hill, Catherine Hill, Laurelle Jackson, Jeanne De Jager, Shameem Jaumdally, Lisa Jose, Faeeza Kana, Simon Kerridge, Prudence Kgagudi, Alison Lawrie, Erica M Lazarus, Gila Lustig, Charlotte Mabuza, Edson Makambwa, Ross Malamatsho, Wendy Zimkhitha Mandindi, Mmatsie Manentsa, Takalani Maoko, Masego Nicole Mathibe, Hosea Matlebjane, Bella Matlonya, Kedidimetse Matshidiso, Nkululeko Mbele, Linda Mbutini, Sibongile Mncube, Nozipho Mncwango, Mapule Moloi, Lynn Morris, Lynelle Mottay, Thandeka Moyo, Lebogang Mpete, Sibekezelo Msomi, Stella Mthombeni, Sihle Mtshali, Yvonne Nkazana Mugodi, Yama Mujadidi, Christian Kabasele Mukendi, Lionel Beya Mukendi, Amit Jawaharlal Nana, Anusha Nana, Bongani Ndlovu, Ayanda Nzimande, Angela Oosthuizen, Brent Oosthuysen, Fatima Osman, Rubeshan Perumal, Sahir Yusuf Petkar, Tricia Philip, Kgomotso Phohu, Sonjia Pieterse, Annah Pitsi, Mosidi Pitsoane, Joan Du Plessis, Emma Plested, Anil Pooran, Ian Poulton, Martin Mosotho Rafuma, Aakifah Bibi Arif Sayed, Fawziyah Thompson, Bonolo Tladinyane, Michele Tomasicchio, Lara van der Merwe, Marquerit van der Merwe, Marion Watson, Peter Zuidewind

Abstract

Background: Assessment of the safety and efficacy of vaccines against the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in different populations is essential, as is investigation of the efficacy of the vaccines against emerging SARS-CoV-2 variants of concern, including the B.1.351 (501Y.V2) variant first identified in South Africa.

Methods: We conducted a multicenter, double-blind, randomized, controlled trial to assess the safety and efficacy of the ChAdOx1 nCoV-19 vaccine (AZD1222) in people not infected with the human immunodeficiency virus (HIV) in South Africa. Participants 18 to less than 65 years of age were assigned in a 1:1 ratio to receive two doses of vaccine containing 5×1010 viral particles or placebo (0.9% sodium chloride solution) 21 to 35 days apart. Serum samples obtained from 25 participants after the second dose were tested by pseudovirus and live-virus neutralization assays against the original D614G virus and the B.1.351 variant. The primary end points were safety and efficacy of the vaccine against laboratory-confirmed symptomatic coronavirus 2019 illness (Covid-19) more than 14 days after the second dose.

Results: Between June 24 and November 9, 2020, we enrolled 2026 HIV-negative adults (median age, 30 years); 1010 and 1011 participants received at least one dose of placebo or vaccine, respectively. Both the pseudovirus and the live-virus neutralization assays showed greater resistance to the B.1.351 variant in serum samples obtained from vaccine recipients than in samples from placebo recipients. In the primary end-point analysis, mild-to-moderate Covid-19 developed in 23 of 717 placebo recipients (3.2%) and in 19 of 750 vaccine recipients (2.5%), for an efficacy of 21.9% (95% confidence interval [CI], -49.9 to 59.8). Among the 42 participants with Covid-19, 39 cases (95.1% of 41 with sequencing data) were caused by the B.1.351 variant; vaccine efficacy against this variant, analyzed as a secondary end point, was 10.4% (95% CI, -76.8 to 54.8). The incidence of serious adverse events was balanced between the vaccine and placebo groups.

Conclusions: A two-dose regimen of the ChAdOx1 nCoV-19 vaccine did not show protection against mild-to-moderate Covid-19 due to the B.1.351 variant. (Funded by the Bill and Melinda Gates Foundation and others; ClinicalTrials.gov number, NCT04444674; Pan African Clinical Trials Registry number, PACTR202006922165132).

Copyright © 2021 Massachusetts Medical Society.

Figures

Figure 1. Enrollment of Participants, Randomization, Vaccine…
Figure 1. Enrollment of Participants, Randomization, Vaccine or Placebo Administration, and Follow-up.
NAAT denotes nucleic acid amplification test.
Figure 2. Pseudovirus and Live-Virus Neutralization Assay…
Figure 2. Pseudovirus and Live-Virus Neutralization Assay Findings.
Panel A depicts the results of pseudovirus assay to assess neutralization of the original SARS-CoV-2 virus in ChAdOx1 nCoV-19 vaccine recipients from the United Kingdom, Brazil, and South Africa. Vaccine serum samples from 107 participants in South Africa who were 18 to 64 years old and seronegative at baseline and were assigned to receive two standard doses were evaluated in a validated pseudovirus neutralization assay at a centralized facility at baseline, at 28 days after the first dose, and at 28 days after the second dose. Results for 226 vaccine recipients enrolled in ChAdOx1 nCoV-19 studies in Brazil and 326 in the United Kingdom have not been published previously but are included for comparative purposes. Boxes show medians and interquartile ranges. In trial participants in the United Kingdom, Brazil, and South Africa, median titers at 28 days after the first dose were 41.35, 46.69, and 131.57, respectively, and 200.44, 154.40, and 276.61 at 28 days after the second dose. The ChAdOx1 nCoV-19 vaccine recipients included in the analysis were randomly selected participants from the efficacy trial who contributed to the pooled vaccine efficacy and safety results reported from those studies.Panel B shows the results of the pseudovirus assay to assess neutralization of the original virus, the RBD triple mutant, and the B.1.351 variant. Serum samples obtained from 13 ChAdOx1 nCoV-19 vaccine recipients without SARS-CoV-2 infection through 41 days after vaccination (left) and 6 placebo recipients who had natural infection-induced antibody (right) were assessed with the pseudovirus assay to assess neutralization activity against the original D614G lineage, an RBD-only chimeric virus containing the K417N, E484K, and N501Y substitutions, and the B.1.351 variant. Background colors indicate dilutional titers, and pie charts summarize the proportions according to dilutional titer. Geometric mean titers against each virus are shown below the graphs. Panel C shows the results of live-virus neutralization assay against the original virus and the B.1.351 variant in 13 vaccine recipients (left) and 6 placebo recipients who had natural infection–induced antibody (right) of B.1.1.117 (the sublineage [GISAID accession EPI_ISL_602622] of B.1.1 used in the assay) and B.1.351 variants. Participants were as for the pseudovirus neutralization assay. Neutralization is represented by the 50% plaque reduction neutralization titer (PRNT50), the reciprocal of the 50% inhibitory dilution per participant. Participants with no detectable neutralization (defined as PRNT50<1) are shaded in red. Bars and associated numbers represent geometric means (using the limit of detection of PRNT50 = 1 for undetectable participants), and boxes 95% confidence intervals.
Figure 3. Kaplan–Meyer Plot of ChAdOx1 nCoV-19…
Figure 3. Kaplan–Meyer Plot of ChAdOx1 nCoV-19 Vaccine Efficacy against Symptomatic Covid-19 Illness of Mild or Moderate Severity after Two Doses, as Compared with Placebo.
The shading represents 95% confidence intervals. The tick marks indicate data censored at the time of one of the following events: a Covid-19 infection that did not meet the trial criteria for symptomatic Covid-19 illness, withdrawal from the trial, or death. The inset shows the same data on an expanded y axis.

References

    1. Lurie N, Saville M, Hatchett R, Halton J. Developing Covid-19 vaccines at pandemic speed. N Engl J Med 2020;382:1969-1973.
    1. Mullard A. COVID-19 vaccine development pipeline gears up. Lancet 2020;395:1751-1752.
    1. Collins FS, Stoffels P. Accelerating COVID-19 Therapeutic Interventions and Vaccines (ACTIV): an unprecedented partnership for unprecedented times. JAMA 2020;323:2455-2457.
    1. Lurie N, Sharfstein JM, Goodman JL. The development of COVID-19 vaccines: safeguards needed. JAMA 2020. July 6 (Epub ahead of print).
    1. Pfizer. Pfizer and BioNTech announce vaccine candidate against COVID-19 achieved success in first interim analysis from phase 3 study. November 9, 2020. ().
    1. Moderna. Moderna’s COVID-19 vaccine candidate meets its primary efficacy endpoint in the first interim analysis of the phase 3 COVE study. November 16, 2020. ().
    1. Polack FP, Thomas SJ, Kitchin N, et al. Safety and efficacy of the BNT162b2 mRNA Covid-19 vaccine. N Engl J Med 2020;383:2603-2615.
    1. Voysey M, Clemens SAC, Madhi SA, et al. Safety and efficacy of the ChAdOx1 nCoV-19 vaccine (AZD1222) against SARS-CoV-2: an interim analysis of four randomised controlled trials in Brazil, South Africa, and the UK. Lancet 2021;397:99-111.
    1. Logunov DY, Dolzhikova IV, Shcheblyakov DV, et al. Safety and efficacy of an rAd26 and rAd5 vector-based heterologous prime-boost COVID-19 vaccine: an interim analysis of a randomised controlled phase 3 trial in Russia. Lancet 2021;397:671-681.
    1. Xia S, Duan K, Zhang Y, et al. Effect of an inactivated vaccine against SARS-CoV-2 on safety and immunogenicity outcomes: interim analysis of 2 randomized clinical trials. JAMA 2020;324:951-960.
    1. World Health Organization. The COVID-19 candidate vaccine landscape and tracker ().
    1. Novavax. Novavax COVID-19 vaccine demonstrates 89.3% efficacy in UK phase 3 trial. January 28, 2021. ().
    1. Johnson & Johnson. Johnson & Johnson COVID-19 vaccine authorized by U.S. FDA for emergency use — first single-shot vaccine in fight against global pandemic. February 27, 2021. ().
    1. Cele S, Gazy I, Jackson L, et al. Escape of SARS-CoV-2 501Y.V2 variants from neutralization by convalescent plasma. January 26, 2021. (). preprint.
    1. Tegally H, Wilkinson E, Giovanetti M, et al. Emergence and rapid spread of a new severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) lineage with multiple spike mutations in South Africa. December 22, 2020. (). preprint.
    1. Barnes CO, Jette CA, Abernathy ME, et al. SARS-CoV-2 neutralizing antibody structures inform therapeutic strategies. Nature 2020;588:682-687.
    1. Greaney AJ, Loes AN, Crawford KHD, et al. Comprehensive mapping of mutations in the SARS-CoV-2 receptor-binding domain that affect recognition by polyclonal human plasma antibodies. Cell Host Microbe 2021. February 8 (Epub ahead of print).
    1. Volz E, Mishra S, Chand M, et al. Transmission of SARS-CoV-2 Lineage B.1.1.7 in England: insights from linking epidemiological and genetic data. January 4, 2021. (). preprint.
    1. Wang P, Liu L, Iketani S, et al. Increased resistance of SARS-CoV-2 variants B.1.351 and B.1.1.7 to antibody neutralization. January 26, 2021. (). preprint.
    1. Public Health England. Investigation of novel SARS-CoV-2 variant: variant of concern 202012/01. Technical briefing 5. 2021. ().
    1. Wibmer CK, Ayres F, Hermanus T, et al. SARS-CoV-2 501Y.V2 escapes neutralization by South African COVID-19 donor plasma. Nat Med 2021. March 2 (Epub ahead of print).
    1. Voloch CM, da Silva FR Jr, de Almeida LGP, et al. Genomic characterization of a novel SARS-CoV-2 lineage from Rio de Janeiro, Brazil. December 26, 2020. (). preprint.
    1. Gröhs Ferrareze PA, Bonetti Franceschi V, de Menezes Mayer A, Dickin Caldana G, Zimerman RA, Thompson CE. E484K as an innovative phylogenetic event for viral evolution: genomic analysis of the E484K spike mutation in SARS-CoV-2 lineages from Brazil. January 27, 2021. (). preprint.
    1. Voysey M, Costa Clemens SA, Madhi SA, et al. Single-dose administration and the influence of the timing of the booster dose on immunogenicity and efficacy of ChAdOx1 nCoV-19 (AZD1222) vaccine: a pooled analysis of four randomised trials. Lancet 2021. February 19 (Epub ahead of print).
    1. Emary KRW, Golubchik T, Aley PK, et al. Efficacy of ChAdOx1 nCoV-19 (AZD1222) vaccine against SARS-CoV-2 VOC 202012/01 (B.1.1.7). February 4, 2021. preprint.
    1. Sattler A, Angermair S, Stockmann H, et al. SARS-CoV-2-specific T cell responses and correlations with COVID-19 patient predisposition. J Clin Invest 2020;130:6477-6489.
    1. National Institute for Communicable Diseases. Dominance of the SARS-CoV-2 501Y.V2 lineage in Gauteng. January 28, 2021. (.) preprint.
    1. Muik A, Wallisch A-K, Sänger B, et al. Neutralization of SARS-CoV-2 lineage B.1.1.7 pseudovirus by BNT162b2 vaccine-elicited human sera. Science 2021. January 29 (Epub ahead of print).
    1. Liu Y, Liu J, Xia H, et al. Neutralizing activity of BNT162b2-elicited serum. N Engl J Med. DOI: 10.1056/NEJMc2102017.
    1. Janssen Vaccines & Prevention B.V. A randomized double-blind, placebo-controlled phase 3 study to assess the efficacy and safety of Ad26.COV2.S for the prevention of SARS-CoV-2-mediated COVID-19 in adults aged 18 years and Older. Clinical protocol. 2020. ().
    1. Folegatti PM, Ewer KJ, Aley PK, et al. Safety and immunogenicity of the ChAdOx1 nCoV-19 vaccine against SARS-CoV-2: a preliminary report of a phase 1/2, single-blind, randomised controlled trial. Lancet 2020;396:467-478.
    1. McMahan K, Yu J, Mercado NB, et al. Correlates of protection against SARS-CoV-2 in rhesus macaques. Nature 2021;590:630-634.
    1. Gavi, the Vaccine Alliance. New collaboration makes further 100 million doses of COVID-19 vaccine available to low- and middle-income countries. 2020. ().
    1. Amnesty International. COVID-19: Oxford/AstraZeneca vaccine a boost for global access, but huge inequality remains. November 23, 2020. ().
    1. McCarthy N. The cost per jab of Covid-19 vaccine candidates. Statista. December 1, 2020. ().
    1. PANGO Lineages. Global report investigating novel coronavirus haplotypes. 2021. ().

Source: PubMed

3
S'abonner