Enteropathogens and Rotavirus Vaccine Immunogenicity in a Cluster Randomized Trial of Improved Water, Sanitation and Hygiene in Rural Zimbabwe

James A Church, Elizabeth T Rogawski McQuade, Kuda Mutasa, Mami Taniuchi, Sandra Rukobo, Margaret Govha, Benjamin Lee, Marya P Carmolli, Bernard Chasekwa, Robert Ntozini, Monica M McNeal, Lawrence H Moulton, Beth D Kirkpatrick, Jie Liu, Eric R Houpt, Jean H Humphrey, James A Platts-Mills, Andrew J Prendergast, James A Church, Elizabeth T Rogawski McQuade, Kuda Mutasa, Mami Taniuchi, Sandra Rukobo, Margaret Govha, Benjamin Lee, Marya P Carmolli, Bernard Chasekwa, Robert Ntozini, Monica M McNeal, Lawrence H Moulton, Beth D Kirkpatrick, Jie Liu, Eric R Houpt, Jean H Humphrey, James A Platts-Mills, Andrew J Prendergast

Abstract

Background: Oral rotavirus vaccines (RVVs) are less efficacious in low-income versus high-income settings, plausibly due to more enteropathogen exposure through poor water, sanitation and hygiene (WASH). We explored associations between enteropathogens and RVV immunogenicity and evaluated the effect of improved WASH on enteropathogen carriage.

Methods: We detected stool enteropathogens using quantitative molecular methods and measured anti-rotavirus immunoglobulin A by enzyme-linked immunosorbent assay in infants enrolled to a cluster randomized 2 × 2 factorial trial of improved WASH and improved infant feeding in Zimbabwe (NCT01824940). We used multivariable regression to explore associations between enteropathogens and RVV seroconversion, seropositivity and geometric mean titer. We evaluated effects of improved WASH on enteropathogen prevalence using linear and binomial regression models with generalized estimating equations.

Results: Among 224 infants with enteropathogen and immunogenicity data, 107 (47.8%) had ≥1 pathogen and 39 (17.4%) had ≥2 pathogens detected at median age 41 days (interquartile range: 35-54). RVV seroconversion was low (23.7%). After adjusting for Sabin-poliovirus quantity, pan-enterovirus quantity was positively associated with RVV seroconversion (relative risk 1.61 per 10-fold increase in pan-enterovirus; 95% confidence interval: 1.35-1.91); in the same model, Sabin quantity was negatively associated with RVV seroconversion (relative risk: 0.76; 95% confidence interval: 0.60-0.96). There were otherwise no meaningful associations between individual or total pathogens (bacteria, viruses, parasites or all pathogens) and any measure of RVV immunogenicity. Enteropathogen detection did not differ between randomized WASH and non-WASH groups.

Conclusions: Enteropathogen infections were common around the time of rotavirus vaccination in rural Zimbabwean infants but did not explain poor RVV immunogenicity and were not reduced by a package of household-level WASH interventions.

Conflict of interest statement

J.A.C. (Grant 201293/Z/16/Z) and A.J.P. (Grant 108065/Z/15/Z) are supported by the Wellcome Trust. E.T.R.M. is supported by the National Institute of Allergy and Infectious Diseases of the National Institutes of Health (Grant K01AI130326). The other authors have no conflicts of interest to disclose.

Figures

Figure 1.
Figure 1.
Associations between (A) individual pathogens and (B) grouped pathogens (grouped pathogen exposures do not include Sabin viruses and rotavirus) and oral rotavirus vaccine immunogenicity. Effect sizes and 95% confidence intervals shown are for the adjusted analysis. aEPEC indicates atypical enteropathogenic Escherichia coli; EAEC, enteroaggregative E. coli; NPEV, non-polio enterovirus.

References

    1. Collaborators GBDDD. Estimates of the global, regional, and national morbidity, mortality, and aetiologies of diarrhoea in 195 countries: a systematic analysis for the Global Burden of Disease Study 2016. Lancet Infect Dis. 2018; 18:1211–1228.
    1. Patel M, Shane AL, Parashar UD, et al. Oral rotavirus vaccines: how well will they work where they are needed most? J Infect Dis. 2009;200(suppl 1):S39–S48.
    1. Armah GE, Sow SO, Breiman RF, et al. Efficacy of pentavalent rotavirus vaccine against severe rotavirus gastroenteritis in infants in developing countries in sub-Saharan Africa: a randomised, double-blind, placebo-controlled trial. Lancet. 2010;376:606–614.
    1. Zaman K, Dang DA, Victor JC, et al. Efficacy of pentavalent rotavirus vaccine against severe rotavirus gastroenteritis in infants in developing countries in Asia: a randomised, double-blind, placebo-controlled trial. Lancet. 2010;376:615–623.
    1. Ruiz-Palacios GM, Pérez-Schael I, Velázquez FR, et al. ; Human Rotavirus Vaccine Study Group. Safety and efficacy of an attenuated vaccine against severe rotavirus gastroenteritis. N Engl J Med. 2006;354:11–22.
    1. Vesikari T, Matson DO, Dennehy P, et al. ; Rotavirus Efficacy and Safety Trial (REST) Study Team. Safety and efficacy of a pentavalent human-bovine (WC3) reassortant rotavirus vaccine. N Engl J Med. 2006;354:23–33.
    1. Parker EP, Ramani S, Lopman BA, et al. Causes of impaired oral vaccine efficacy in developing countries. Future Microbiol. 2018;13:97–118.
    1. Kotloff KL, Nataro JP, Blackwelder WC, et al. Burden and aetiology of diarrhoeal disease in infants and young children in developing countries (the Global Enteric Multicenter Study, GEMS): a prospective, case-control study. Lancet. 2013;382:209–222.
    1. Wang H, Moon S, Wang Y, et al. Multiple virus infection alters rotavirus replication and expression of cytokines and toll-like receptors in intestinal epithelial cells. Virus Res. 2012;167:48–55.
    1. Praharaj I, Parker EPK, Giri S, et al. Influence of nonpolio enteroviruses and the bacterial gut microbiota on oral poliovirus vaccine response: a study from South India. J Infect Dis. 2019;219:1178–1186.
    1. Church JA, Parker EP, Kirkpatrick BD, et al. Interventions to improve oral vaccine performance: a systematic review and meta-analysis. Lancet Infect Dis. 2019;19:203–214.
    1. Parker EPK, Praharaj I, Zekavati A, et al. Influence of the intestinal microbiota on the immunogenicity of oral rotavirus vaccine given to infants in south India. Vaccine. 2018;36:264–272.
    1. Taniuchi M, Platts-Mills JA, Begum S, et al. Impact of enterovirus and other enteric pathogens on oral polio and rotavirus vaccine performance in Bangladeshi infants. Vaccine. 2016;34:3068–3075.
    1. Church JA, Rukobo S, Govha M, et al. The impact of improved water, sanitation and hygiene on oral rotavirus vaccine immunogenicity in Zimbabwean infants: sub-study of a cluster-randomized trial. Clin Infect Dis. 2019;pii:ciz140.
    1. Humphrey JH, Jones AD, Manges A, et al. ; Sanitation Hygiene Infant Nutrition Efficacy (SHINE) Trial Team. The Sanitation Hygiene Infant Nutrition Efficacy (SHINE) Trial: rationale, design, and methods. Clin Infect Dis. 2015;61(suppl 7):S685–S702.
    1. Morgan PR. A Ventilated Pit Privy. Appropriate Technology. 1979;6:10–11.
    1. Watt J. The tippy tap: a simple handwashing device for rural areas. J Trop Pediatr. 1988;34:91–92.
    1. Humphrey JH, Mbuya MNN, Ntozini R, et al. ; Sanitation Hygiene Infant Nutrition Efficacy (SHINE) Trial Team. Independent and combined effects of improved water, sanitation, and hygiene, and improved complementary feeding, on child stunting and anaemia in rural Zimbabwe: a cluster-randomised trial. Lancet Glob Health. 2019;7:e132–e147.
    1. UNICEF. Zimbabwe: WHO and UNICEF estimates of immunization coverage: 2016 revision. 2016.
    1. Prendergast AJ, Humphrey JH, Mutasa K, et al. ; Sanitation Hygiene Infant Nutrition Efficacy (SHINE) Trial Team. Assessment of environmental enteric dysfunction in the SHINE trial: methods and challenges. Clin Infect Dis. 2015;61(suppl 7):S726–S732.
    1. Bernstein DI, Smith VE, Sherwood JR, et al. Safety and immunogenicity of live, attenuated human rotavirus vaccine 89-12. Vaccine. 1998;16:381–387.
    1. Patel M, Glass RI, Jiang B, et al. A systematic review of anti-rotavirus serum IgA antibody titer as a potential correlate of rotavirus vaccine efficacy. J Infect Dis. 2013;208:284–294.
    1. Ward RL, Bernstein DI, Shukla R, et al. Effects of antibody to rotavirus on protection of adults challenged with a human rotavirus. J Infect Dis. 1989;159:79–88.
    1. Rogawski ET, Liu J, Platts-Mills JA, et al. ; MAL-ED Network Investigators. Use of quantitative molecular diagnostic methods to investigate the effect of enteropathogen infections on linear growth in children in low-resource settings: longitudinal analysis of results from the MAL-ED cohort study. Lancet Glob Health. 2018;6:e1319–e1328.
    1. Liu J, Gratz J, Amour C, et al. Optimization of quantitative PCR methods for enteropathogen detection. PLoS One. 2016;11:e0158199.
    1. Liu J, Platts-Mills JA, Juma J, et al. Use of quantitative molecular diagnostic methods to identify causes of diarrhoea in children: a reanalysis of the GEMS case-control study. Lancet. 2016;388:1291–1301.
    1. Taniuchi M, Begum S, Uddin MJ, et al. Kinetics of poliovirus shedding following oral vaccination as measured by quantitative reverse transcription-PCR versus culture. J Clin Microbiol. 2015;53:206–211.
    1. Benjamini Y, Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc Series B (Methodological). 1995;57:289–300.
    1. Platts-Mills JA, Babji S, Bodhidatta L, et al. ; MAL-ED Network Investigators. Pathogen-specific burdens of community diarrhoea in developing countries: a multisite birth cohort study (MAL-ED). Lancet Glob Health. 2015;3:e564–e575.
    1. Taniuchi M, Sobuz SU, Begum S, et al. Etiology of diarrhea in Bangladeshi infants in the first year of life analyzed using molecular methods. J Infect Dis. 2013;208:1794–1802.
    1. Mbuya MNN, Matare CR, Tavengwa NV, et al. ; SHINE Trial Team. Early initiation and exclusivity of breastfeeding in rural Zimbabwe: impact of a breastfeeding intervention delivered by village health workers. Curr Dev Nutr. 2019;3:nzy092.
    1. Parker EP, Kampmann B, Kang G, et al. Influence of enteric infections on response to oral poliovirus vaccine: a systematic review and meta-analysis. J Infect Dis. 2014;210:853–864.
    1. Emperador DM, Velasquez DE, Estivariz CF, et al. Interference of monovalent, bivalent, and trivalent oral poliovirus vaccines on monovalent rotavirus vaccine immunogenicity in rural Bangladesh. Clin Infect Dis. 2016;62:150–156.
    1. Church JA, Parker EP, Kosek MN, et al. Exploring the relationship between environmental enteric dysfunction and oral vaccine responses. Future Microbiol. 2018;13:1055–1070.
    1. Harris VC, Armah G, Fuentes S, et al. Significant correlation between the infant gut microbiome and rotavirus vaccine response in rural Ghana. J Infect Dis. 2017;215:34–41.
    1. Glass RI, Parashar UD, Bresee JS, et al. Rotavirus vaccines: current prospects and future challenges. Lancet. 2006;368:323–332.
    1. Lee B, Carmolli M, Dickson DM, et al. Rotavirus-specific immunoglobulin A responses are impaired and serve as a suboptimal correlate of protection among infants in Bangladesh. Clin Infect Dis. 2018;67:186–192.

Source: PubMed

3
Tilaa