Computer-aided diagnosis of colorectal polyps using linked color imaging colonoscopy to predict histology

Min Min, Song Su, Wenrui He, Yiliang Bi, Zhanyu Ma, Yan Liu, Min Min, Song Su, Wenrui He, Yiliang Bi, Zhanyu Ma, Yan Liu

Abstract

We developed a computer-aided diagnosis (CAD) system based on linked color imaging (LCI) images to predict the histological results of polyps by analyzing the colors of the lesions. A total of 139 images of adenomatous polyps and 69 images of non-adenomatous polyps obtained from our hospital were collected and used to train the CAD system. A test set of LCI images, including both adenomatous and non-adenomatous polyps, was prospectively collected from patients who underwent colonoscopies between Oct and Dec 2017; this test set was used to assess the diagnostic abilities of the CAD system compared to those of human endoscopists (two experts and two novices). The accuracy, sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV) of this novel CAD system for the training set were 87.0%, 87.1%, 87.0%, 93.1%, and 76.9%, respectively. The test set included 115 adenomatous polyps and 66 non-adenomatous polyps that were prospectively collected. The CAD system identified adenomatous or non-adenomatous polyps in the test set with an accuracy of 78.4%, a sensitivity of 83.3%, a specificity of 70.1%, a PPV of 82.6%, and an NPV of 71.2%. The accuracy of the CAD system was comparable to that of the expert endoscopists (78.4% vs 79.6%; p = 0.517). In addition, the diagnostic accuracy of the novices was significantly lower to the performance of the experts (70.7% vs 79.6%; p = 0.018). A novel CAD system based on LCI could be a rapid and powerful decision-making tool for endoscopists.

Conflict of interest statement

This work was supported by the Beijing Nova Program (No. Z171100001117090).

Figures

Figure 1
Figure 1
Flowchart of the training process. The original LCI picture is preprocessed to a 64 × 64 image where each pixel is represented as a 3-D vector (with R value, G value and B value). Transform the RGB color space to HLS. Now each pixel is represented as a different 3-D vector with H value, L value and S value. Concatenate 2 vectors to a 6-D vector. Do concatenation at every pixel of the image then we have a 64 × 64 × 6 pixels block. Feed these blocks into two initialized models separately to train for two independent GMMs.
Figure 2
Figure 2
Flowchart of the threshold calculation. After training we obtain two GMMs. Transform all training images to pixels blocks and input the blocks to GMMs. We get two scores for each block consequently. Record the difference between the two scores of all blocks and plot the training ROC curve. Choose the point where the sensitivity is approximately equal to the specificity as the Threshold.
Figure 3
Figure 3
Flowchart of the test process. When a new image comes we transform it to pixels block and input it to two GMMs and obtain two scores. Get the difference between these two scores and compare it with the Threshold. If the difference is larger than Threshold, the image if classified as adenomatous image. Otherwise it is inflammatory image.
Figure 4
Figure 4
Receiver operator characteristic curve for the CAD differentiation of adenomatous versus hyperplastic polyps in the training set. AUC, area under the curve.

References

    1. Chen, P. J. et al. Accurate Classification of Diminutive Colorectal Polyps Using Computer-aided Analysis. Gastroenterology (2017).
    1. Arnold M, et al. Global patterns and trends in colorectal cancer incidence and mortality. Gut. 2017;66:683–91. doi: 10.1136/gutjnl-2015-310912.
    1. Fearon ER, Vogelstein B. A genetic model for colorectal tumorigenesis. Cell. 1990;61:759–67. doi: 10.1016/0092-8674(90)90186-I.
    1. East JE, Saunders BP, Jass JR. Sporadic and syndromic hyperplastic polyps and serrated adenomas of the colon: classification, molecular genetics, natural history, and clinical management. Gastroenterology clinics of North America. 2008;37(v):25–46. doi: 10.1016/j.gtc.2007.12.014.
    1. Rex DK. Narrow-band imaging without optical magnification for histologic analysis of colorectal polyps. Gastroenterology. 2009;136:1174–81. doi: 10.1053/j.gastro.2008.12.009.
    1. Wada Y, et al. Diagnosis of colorectal lesions with the magnifying narrow-band imaging system. Gastrointestinal endoscopy. 2009;70:522–31. doi: 10.1016/j.gie.2009.01.040.
    1. Chiu HM, et al. A prospective comparative study of narrow-band imaging, chromoendoscopy, and conventional colonoscopy in the diagnosis of colorectal neoplasia. Gut. 2007;56:373–9. doi: 10.1136/gut.2006.099614.
    1. Tischendorf JJ, et al. Value of magnifying chromoendoscopy and narrow band imaging (NBI) in classifying colorectal polyps: a prospective controlled study. Endoscopy. 2007;39:1092–6. doi: 10.1055/s-2007-966781.
    1. Rastogi A, et al. Recognition of surface mucosal and vascular patterns of colon polyps by using narrow-band imaging: interobserver and intraobserver agreement and prediction of polyp histology. Gastrointestinal endoscopy. 2009;69:716–22. doi: 10.1016/j.gie.2008.09.058.
    1. Tischendorf JJ, et al. Value of magnifying endoscopy in classifying colorectal polyps based on vascular pattern. Endoscopy. 2010;42:22–7. doi: 10.1055/s-0029-1215268.
    1. Ladabaum U, et al. Real-time optical biopsy of colon polyps with narrow band imaging in community practice does not yet meet key thresholds for clinical decisions. Gastroenterology. 2013;144:81–91. doi: 10.1053/j.gastro.2012.09.054.
    1. Kuiper, T., et al. Accuracy for optical diagnosis of small colorectal polyps in nonacademic settings. Clinical gastroenterology and hepatology: the official clinical practice journal of the American Gastroenterological Association10, 1016–20; quize 79 (2012).
    1. Uchiyama K, et al. Assessment of Endoscopic Mucosal Healing of Ulcerative Colitis Using Linked Colour Imaging, a Novel Endoscopic Enhancement System. Journal of Crohn’s & colitis. 2017;11:963–9. doi: 10.1093/ecco-jcc/jjx026.
    1. Fukuda H, et al. Linked color imaging technology facilitates early detection of flat gastric cancers. Clinical journal of gastroenterology. 2015;8:385–9. doi: 10.1007/s12328-015-0612-9.
    1. Inomata H, et al. Efficacy of a novel auto-fluorescence imaging system with computer-assisted color analysis for assessment of colorectal lesions. World journal of gastroenterology. 2013;19:7146–53. doi: 10.3748/wjg.v19.i41.7146.
    1. Kominami Y, et al. Computer-aided diagnosis of colorectal polyp histology by using a real-time image recognition system and narrow-band imaging magnifying colonoscopy. Gastrointestinal endoscopy. 2016;83:643–9. doi: 10.1016/j.gie.2015.08.004.
    1. Misawa M, et al. Accuracy of computer-aided diagnosis based on narrow-band imaging endocytoscopy for diagnosing colorectal lesions: comparison with experts. International journal of computer assisted radiology and surgery. 2017;12:757–66. doi: 10.1007/s11548-017-1542-4.
    1. Kuiper T, et al. Automatic optical diagnosis of small colorectal lesions by laser-induced autofluorescence. Endoscopy. 2015;47:56–62.
    1. Aihara H, et al. Computer-aided diagnosis of neoplastic colorectal lesions using ‘real-time’ numerical color analysis during autofluorescence endoscopy. European journal of gastroenterology & hepatology. 2013;25:488–94. doi: 10.1097/MEG.0b013e32835c6d9a.
    1. Gross S, et al. Computer-based classification of small colorectal polyps by using narrow-band imaging with optical magnification. Gastrointestinal endoscopy. 2011;74:1354–9. doi: 10.1016/j.gie.2011.08.001.
    1. Ono S, Abiko S, Kato M. Linked color imaging enhances gastric cancer in gastric intestinal metaplasia. Digestive endoscopy: official journal of the Japan Gastroenterological Endoscopy Society. 2017;29:230–1. doi: 10.1111/den.12757.
    1. Sun X, et al. Linked color imaging application for improving the endoscopic diagnosis accuracy: a pilot study. Scientific reports. 2016;6:33473. doi: 10.1038/srep33473.
    1. Hisamatsu, T., Ohno, A. & Chiba, T. Linked Color Imaging identified UC Associated Colorectal Cancer. A case report. Digestive endoscopy: official journal of the Japan Gastroenterological Endoscopy Society (2017).
    1. Yoshida N, et al. Linked color imaging improves the visibility of various featured colorectal polyps in an endoscopist’s visibility and color difference value. International journal of colorectal disease. 2017;32:1253–60. doi: 10.1007/s00384-017-2855-z.
    1. Takemura Y, et al. Computer-aided system for predicting the histology of colorectal tumors by using narrow-band imaging magnifying colonoscopy (with video) Gastrointestinal endoscopy. 2012;75:179–85. doi: 10.1016/j.gie.2011.08.051.
    1. Tischendorf JJ, et al. Computer-aided classification of colorectal polyps based on vascular patterns: a pilot study. Endoscopy. 2010;42:203–7. doi: 10.1055/s-0029-1243861.
    1. Byrne, M. F. et al. Real-time differentiation of adenomatous and hyperplastic diminutive colorectal polyps during analysis of unaltered videos of standard colonoscopy using a deep learning model. Gut (2017).
    1. Jayanna HS, Prasanna SRM. An experimental comparison of modelling techniques for speaker recognition under limited data condition. Sadhana. 2009;34.5:717. doi: 10.1007/s12046-009-0042-9.

Source: PubMed

3
Tilaa