Adults hospitalised with acute respiratory illness rarely have detectable bacteria in the absence of COPD or pneumonia; viral infection predominates in a large prospective UK sample

Tristan W Clark, Marie-jo Medina, Sally Batham, Martin D Curran, Surendra Parmar, Karl G Nicholson, Tristan W Clark, Marie-jo Medina, Sally Batham, Martin D Curran, Surendra Parmar, Karl G Nicholson

Abstract

Objectives: Many adult patients hospitalised with acute respiratory illness have viruses detected but the overall importance of viral infection compared to bacterial infection is unclear.

Methods: Patients were recruited from two acute hospital sites in Leicester (UK) over 3 successive winters. Samples were taken for viral and bacterial testing.

Results: Of the 780 patients hospitalised with acute respiratory illness 345 (44%) had a respiratory virus detected. Picornaviruses were the most commonly isolated viruses (detected in 23% of all patients). Virus detection rates exceeded 50% in patients with exacerbation of asthma (58%), acute bronchitis and Influenza-like-illness (64%), and ranged from 30 to 50% in patients with an exacerbation of COPD (38%), community acquired pneumonia (36%) and congestive cardiac failure (31%). Bacterial detection was relatively frequent in patients with exacerbation of COPD and pneumonia (25% and 33% respectively) but was uncommon in all other groups. Antibiotic use was high across all clinical groups (76% overall) and only 21% of all antibiotic use occurred in patients with detectable bacteria.

Conclusions: Respiratory viruses are the predominant detectable aetiological agents in most hospitalised adults with acute respiratory illness. Antibiotic usage in hospital remains excessive including in clinical conditions associated with low rates of bacterial detection. Efforts at reducing excess antibiotic use should focus on these groups as a priority. Registered International Standard Controlled Trial Number: 21521552.

Keywords: Acute respiratory illness; Adults; Antibiotics; Hospitalisation; Respiratory viruses.

Copyright © 2014 The British Infection Association. Published by Elsevier Ltd. All rights reserved.

Figures

Figure 1
Figure 1
Trial profile. ILI, influenza-like illness.
Figure 2
Figure 2
Number and proportion of all patients with respiratory viruses detected (n = 780). *RSV, parainfluenza (types 1–4), human metapneumovirus (hMPV), coronavirus (group 1 and 2) and adenovirus. †Dual viral detections are detailed in the box below.
Figure 3
Figure 3
a. Proportions of respiratory viruses detected by clinical group (n = 780). ILI, influenza-like illness. Other viruses includes; RSV, parainfluenza (virus type 1–4), hMPV, coronaviruses (group 1 and 2), and adenovirus. b. Proportion of patients with viruses only detected, bacteria only detected, viruses and bacteria detected together and no pathogen detected, by clinical group (n = 780). ILI, influenza-like illness. Data represented are for all patients including those with incomplete sampling for bacteria.
Figure 4
Figure 4
Antibiotic use in patients by aetiology (n = 758). Mixed detection refers to the concurrent detection of viruses and bacteria in the same patient.

References

    1. Department of Health hospital episode statistics 1998–2008 . 2009. NHS HES online. Available at:
    1. Mansbach J.M., McAdam A.J., Clark S., Hain P.D., Flood R.G., Acholonu U. Prospective multicenter study of the viral etiology of bronchiolitis in the emergency department. Acad Emerg Med. 2008;15(2):111–118.
    1. Juvén T., Mertsola J., Waris M., Leinonen M., Meurman O., Roivainen M. Etiology of community-acquired pneumonia in 254 hospitalized children. Pediatr Infect Dis J. 2000;19(4):293–298.
    1. Papadopoulos N.G., Christodoulou I., Rohde G., Agache I., Almqvist C., Bruno A. Viruses and bacteria in acute asthma exacerbations – A GA2LEN-DARE* systematic review. Allergy. 2011;66:458–468.
    1. Mohan A., Chandra S., Agarwal D., Guleria R., Broor S., Gaur B. Prevalence of viral infection detected by PCR and RT-PCR in patients with acute exacerbation of COPD: a systematic review. Respirology. 2010;15(3):536–542.
    1. Jennings L.C., Anderson T.P., Beynon K.A., Chua A., Laing R.T., Werno A.M. Incidence and characteristics of viral community-acquired pneumonia in adults. Thorax. 2008;63(1):42–48.
    1. Johansson N., Kalin M., Tiveljung-Lindell A., Giske C.G., Hedlund J. Etiology of community-acquired pneumonia: increased microbiological yield with new diagnostic methods. Clin Infect Dis. 2010;50(2):202–209.
    1. Templeton K.E., Scheltinga S.A., van den Eeden W.C., Graffelman A.W., van den Broek P.J., Claas E.C. Improved diagnosis of the etiology of community-acquired pneumonia with real-time polymerase chain reaction. Clin Infect Dis. 2005;41(3):345–351.
    1. Johnstone J., Majumdar S.R., Fox J.D., Marrie T.J. Viral infection in adults hospitalized with community-acquired pneumonia: prevalence, pathogens, and presentation. Chest. 2008;134(6):1141–1148.
    1. Lieberman D., Shimoni A., Shemer-Avni Y., Keren-Naos A., Shtainberg R., Lieberman D. Respiratory viruses in adults with community-acquired pneumonia. Chest. 2010;138(4):811–816.
    1. Falsey A.R., Hennessey P.A., Formica M.A., Cox C., Walsh E.E. Respiratory syncytial virus infection in elderly and high-risk adults. N Engl J Med. 2005;352(17):1749–1759.
    1. Widmer K., Zhu Y., Williams J.V., Griffin M.R., Edwards K.M., Talbot H.K. Rates of hospitalizations for respiratory syncytial virus, human metapneumovirus, and influenza virus in older adults. J Infect Dis. 2012;206(1):56–62.
    1. Falsey A.R., Becker K.L., Swinburne A.J., Nylen E.S., Formica M.A., Hennessey P.A. Bacterial complications of respiratory tract viral illness: a comprehensive evaluation. J Infect Dis. 2013;208(3):432–441.
    1. Fridkin S., Baggs J., Fagan R., Magill S., Pollack L.A., Malpiedi P. Centers for Disease Control and Prevention (CDC). Vital signs: improving antibiotic use among hospitalized patients. MMWR Morb Mortal Wkly Rep. 2014;63(9):194–200.
    1. Smith S.M., Fahey T., Smucny J., Becker L.A. Antibiotics for acute bronchitis. Cochrane Database Syst Rev. 2014;3:CD000245.
    1. Graham V.A., Milton A.F., Knowles G.K., Davies R.J. Routine antibiotics in hospital management of acute asthma. Lancet. 1982;1(8269):418–420.
    1. Ram F.S., Rodriguez-Roisin R., Granados-Navarrete A., Garcia-Aymerich J., Barnes N.C. Antibiotics for exacerbations of chronic obstructive pulmonary disease. Cochrane Database Syst Rev. 2006 (2)(2):CD004403.
    1. National Clinical Guideline Centre . National Clinical Guideline Centre; London: 2010. Chronic obstructive pulmonary disease: management of chronic obstructive pulmonary disease in adults in primary and secondary care. Available from:
    1. Hawkey P.M., Jones A.M. The changing epidemiology of resistance. J Antimicrob Chemother. 2009;64(Suppl 1):i3–10.
    1. Steinman M.A., Gonzales R., Linder J.A., Landefeld C.S. Changing use of antibiotics in community-based outpatient practice, 1991–1999. Ann Intern Med. 2003;138(7):525–533.
    1. Dellit T.H., Owens R.C., McGowan J.E., Jr., Gerding D.N., Weinstein R.A., Burke J.P. Infectious Diseases Society of America and the Society for Healthcare Epidemiology of America guidelines for developing an institutional program to enhance antimicrobial stewardship. Clin Infect Dis. 2007;44(2):159–177.
    1. Bramer G.R. International statistical classification of diseases and related health problems. Tenth revision. World Health Stat Q. 1988;41(1):32–36.
    1. Ellis J.S., Curran M.D. Simultaneous molecular detection and confirmation of influenza A H5, with internal control. Diagnostic virology protocols (Methods in Molecular Biology series) In: Stephenson J.R., Warnes A., editors. 2nd ed. Vol. 665. Humana Press; 2011. pp. 161–181.
    1. Nicholson K.G., Kent J., Hammersley V., Cancio E. Acute viral infections of upper respiratory tract in elderly people living in the community: comparative, prospective, population based study of disease burden. BMJ. 1997;315(7115):1060–1064.
    1. Krüger S., Ewig S., Papassotiriou J., Kunde J., Marre R., von Baum H., CAPNETZ Study Group Inflammatory parameters predict etiologic patterns but do not allow for individual prediction of etiology in patients with CAP: results from the German competence network CAPNETZ. Respir Res. 2009;10:65.
    1. Ingram P.R., Inglis T., Moxon D., Speers D. Procalcitonin and C-reactive protein in severe 2009 H1N1 influenza infection. Intensive Care Med. 2010 Mar;36(3):528–532.
    1. Lim W.S., Baudouin S.V., George R.C., Hill A.T., Jamieson C., Le Jeune I. Pneumonia guidelines committee of the BTS standards of care committee. BTS guidelines for the management of community acquired pneumonia in adults: update 2009. Thorax. 2009;64(Suppl. 3) iii1–55.
    1. Houck P.M., Bratzler D.W., Nsa W., Ma A., Bartlett J.G. Timing of antibiotic administration and outcomes for medicare patients hospitalized with community-acquired pneumonia. Arch Intern Med. 2004;164(6):637–644.
    1. Cesario T.C. Viruses associated with pneumonia in adults. Clin Infect Dis. 2012;55(1):107–113.
    1. Brundage J.F. Interactions between influenza and bacterial respiratory pathogens: implications for pandemic preparedness. Lancet Infect Dis. 2006;6:303–312.
    1. Stolz D., Christ-Crain M., Bingisser R., Leuppi J., Miedinger D., Müller C. Antibiotic treatment of exacerbations of COPD: a randomized, controlled trial comparing procalcitonin-guidance with standard therapy. Chest. 2007;131(1):9–19.
    1. Nguyen-Van-Tam J.S., Openshaw P.J., Hashim A., Gadd E.M., Lim W.S., Semple M.G. Influenza Clinical Information Network (FLU-CIN). Risk factors for hospitalisation and poor outcome with pandemic A/H1N1 influenza: United Kingdom first wave. Thorax. May-September 2009;2010(65):645–651.
    1. Sutherland E.R., King T.S., Icitovic N., Ameredes B.T., Bleecker E., Boushey H.A. National Heart, Lung and Blood Institute's Asthma Clinical Research Network. A trial of clarithromycin for the treatment of suboptimally controlled asthma. J Allergy Clin Immunol. 2010;126(4):747–753.
    1. British Thoracic Society Scottish Intercollegiate Guidelines Network BTS guidelines: British guideline on the management of Asthma. Thorax. 2008;63:iv1–iv121.
    1. Gonzales R., Sande M.A. Uncomplicated acute bronchitis. Ann Intern Med. 2000;133(12):981–991.
    1. Hombrouck A., Sabbe M., Van Casteren V., Wuillaume F., Hue D., Reynders M. Viral aetiology of influenza-like illness in Belgium during the influenza A(H1N1)2009 pandemic. Eur J Clin Microbiol Infect Dis. 2012;31(6):999–1007.
    1. Thiberville S.D., Ninove L., Vu Hai V., Botelho-Nevers E., Gazin C., Thirion L. The viral etiology of an influenza-like illness during the 2009 pandemic. J Med Virol. 2012;84(7):1071–1079.
    1. Little P., Stuart B., Moore M., Coenen S., Butler C.C., Godycki-Cwirko M. Amoxicillin for acute lower-respiratory-tract infection in primary care when pneumonia is not suspected: a 12-country, randomised, placebo-controlled trial. Lancet Infect Dis. 2013;13(2):123–129.
    1. National Institute for Health and Clinical Excellence . 2009. Amantadine, oseltamivir, and zanamivir for the treatment of influenza London: NICE.
    1. Muthuri S.G., Myles P.R., Venkatesan S., Leonardi-Bee J., Nguyen-Van-Tam J.S. Impact of neuraminidase inhibitor treatment on outcomes of public health importance during the 2009–2010 influenza A(H1N1) pandemic: a systematic review and meta-analysis in hospitalized patients. J Infect Dis. 2013 Feb15;207(4):553–563.

Source: PubMed

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