A Novel 5-Cytokine Panel Outperforms Conventional Predictive Markers of Persistent Organ Failure in Acute Pancreatitis

Christopher Langmead, Peter J Lee, Pedram Paragomi, Phil Greer, Kim Stello, Phil A Hart, David C Whitcomb, Georgios I Papachristou, Christopher Langmead, Peter J Lee, Pedram Paragomi, Phil Greer, Kim Stello, Phil A Hart, David C Whitcomb, Georgios I Papachristou

Abstract

Introduction: Existing laboratory markers and clinical scoring systems have shown suboptimal accuracies for early prediction of persistent organ failure (POF) in acute pancreatitis (AP). We used information theory and machine learning to select the best-performing panel of circulating cytokines for predicting POF early in the disease course and performed verification of the cytokine panel's prognostic accuracy in an independent AP cohort.

Methods: The derivation cohort included 60 subjects with AP with early serum samples collected between 2007 and 2010. Twenty-five cytokines associated with an acute inflammatory response were ranked by computing the mutual information between their levels and the outcome of POF; 5 high-ranking cytokines were selected. These cytokines were subsequently measured in early serum samples of an independent prospective verification cohort of 133 patients (2012-2016), and the results were trained in a Random Forest classifier. Cross-validated performance metrics were compared with the predictive accuracies of conventional laboratory tests and clinical scores.

Results: Angiopoietin 2, hepatocyte growth factor, interleukin 8, resistin, and soluble tumor necrosis factor receptor 1A were the highest-ranking cytokines in the derivation cohort; each reflects a pathologic process relevant to POF. A Random Forest classifier trained the cytokine panel in the verification cohort and achieved a 10-fold cross-validated accuracy of 0.89 (area under the curve 0.91, positive predictive value 0.89, and negative predictive value 0.90), which outperformed individual cytokines, laboratory tests, and clinical scores (all P ≤ 0.006).

Discussion: We developed a 5-cytokine panel, which accurately predicts POF early in the disease process and significantly outperforms the prognostic accuracy of existing laboratory tests and clinical scores.

Trial registration: ClinicalTrials.gov NCT03075605.

Conflict of interest statement

Guarantor of the article: Georgios I. Papachristou, MD, PhD.

Specific author contributions: Christopher Langmead, PhD, and Peter J. Lee, MBChB are first co-authors. Christopher Langmead, PhD, and Peter J. Lee, MBChB, contributed equally to this work. David C. Whitcomb, MD, PhD, and Georgios I. Papachristou, MD, PhD, codirected this project. C.L.: planning statistical methodology, statistical analysis, interpretation of data, and manuscript review. P.J.L.: interpretation of data and manuscript drafting. P.P.: data collection and manuscript review. P.G.: execution of the experiments, data collection, interpretation of data, and manuscript review. K.S.: execution of the experiments and data collection. P.A.H.: interpretation of data and manuscript review. D.C.W. conception of the study, interpretation of data, and manuscript review. G.I.P.: conception of the study, interpretation of data, manuscript drafting, and direct supervision of the manuscript.

Financial support: This research was funded by the Department of Veterans Affairs Merit Review I01CX000272 (G.I.P.), the U.S. Department of Defense Congressionally Directed Medical Research Programs (CDMRP) Awards W81XWH-14-1-0376 (D.C.W.) and W81XWH-17-1-0502 (D.C.W.). The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.

Potential competing interests: The authors report no conflicts of interest directly related to this research.

Copyright © 2021 The Author(s). Published by Wolters Kluwer Health, Inc. on behalf of The American College of Gastroenterology.

Figures

Figure 1.
Figure 1.
Comparisons of cytokine levels between the mild/moderately severe group (i.e., no POF; green) and the severe group (i.e., POF present; red) in the verification cohort. All P values were <0.001 when comparing cytokine levels between groups. Ang-2, angiopoietin 2; HGF, hepatocyte growth factor; IL-8, interleukin 8; POF, persistent organ failure; TNF-R1, tumor necrosis factor alpha receptor superfamily 1A.
Figure 2.
Figure 2.
Receiver operating characteristic (ROC) curves comparing the cytokine panel (blue) to the clinical panel (black), BISAP (red), and BUN (green) in the verification cohort. AUC, area under the curve; BISAP, Bedside Index of Severity of Acute Pancreatitis; BUN, blood urea nitrogen.
Figure 3.
Figure 3.
Proposed conceptual model for prediction of severe acute pancreatitis. The figure was constructed to aid discussion of the results and is not meant to exhaustively represent all cytokines and biomarkers associated with acute pancreatitis. IL, interleukin; HGF, hepatocyte growth factor; TNF-α, tumor necrosis factor alpha.

References

    1. Lee PJ, Papachristou GI. New insights into acute pancreatitis. Nat Rev Gastroenterol Hepatol 2019;16:479–96.
    1. Petrov MS, Yadav D. Global epidemiology and holistic prevention of pancreatitis. Nat Rev Gastroenterol Hepatol 2019;16:175–84.
    1. Peery AF, Crockett SD, Barritt AS, et al. . Burden of Gastrointestinal, liver, and pancreatic diseases in the United States. Gastroenterology 2015;149:1731–41.e3.
    1. Singh VK, Wu BU, Bollen TL, et al. . Early systemic inflammatory response syndrome is associated with severe acute pancreatitis. Clin Gastroenterol Hepatol 2009;7:1247–51.
    1. Zubia-Olaskoaga F, Maravi-Poma E, Urreta-Barallobre I, et al. . Comparison between revised Atlanta classification and determinant-based classification for acute pancreatitis in intensive care medicine. Why do not use a modified determinant-based classification? Crit Care Med 2016;44:910–7.
    1. Dellinger EP, Forsmark CE, Layer P, et al. . Determinant-based classification of acute pancreatitis severity: An international multidisciplinary consultation. Ann Surg 2012;256:875–80.
    1. Banks PA, Bollen TL, Dervenis C, et al. . Classification of acute pancreatitis—2012: Revision of the Atlanta classification and definitions by international consensus. Gut 2013;62:102–11.
    1. Schepers NJ, Bakker OJ, Besselink MG, et al. . Impact of characteristics of organ failure and infected necrosis on mortality in necrotising pancreatitis. Gut 2019;68:1044–51.
    1. van Brunschot S, van Grinsven J, van Santvoort HC, et al. . Endoscopic or surgical step-up approach for infected necrotising pancreatitis: A multicentre randomised trial. Lancet 2018;391:51–8.
    1. Mounzer R, Langmead CJ, Wu BU, et al. . Comparison of existing clinical scoring systems to predict persistent organ failure in patients with acute pancreatitis. Gastroenterology 2012;142:1476.
    1. Kany S, Vollrath JT, Relja B. Cytokines in inflammatory disease. Int J Mol Sci 2019;20:6008.
    1. Gong T, Liu L, Jiang W, et al. . DAMP-sensing receptors in sterile inflammation and inflammatory diseases. Nat Rev Immunol 2020;20:95–112.
    1. Vipperla K, Papachristou GI, Easler J, et al. . Risk of and factors associated with readmission after a sentinel attack of acute pancreatitis. Clin Gastroenterol Hepatol 2014;12:1911–9.
    1. Papachristou GI, Muddana V, Yadav D, et al. . Comparison of BISAP, Ranson's, APACHE-II, and CTSI scores in predicting organ failure, complications, and mortality in acute pancreatitis. Am J Gastroenterol 2010;105:435–41; quiz 442.
    1. Tenner S, Baillie J, DeWitt J, et al. . American College of Gastroenterology guideline: Management of acute pancreatitis. Am J Gastroenterol 2013;108:1400–15; 1416.
    1. Papachristou GI, Sass DA, Avula H, et al. . Is the monocyte chemotactic protein-1 -2518 G allele a risk factor for severe acute pancreatitis? Clin Gastroenterol Hepatol 2005;3:475–81.
    1. Fayyad UM, Irani KB. Multi-interval discretization of continuous-valued attributes for classification learning. JCAI 1993:1022–7.
    1. MacKay DJC. Information Theory, Inference & Learning Algorithms. Cambridge University Press: New York, NY, 2002.
    1. MESO QuickPlex SQ 120 Features and Specifications. (). Accessed February 3, 2020.
    1. Whitcomb DC, Muddana V, Langmead CJ, et al. . Angiopoietin-2, a regulator of vascular permeability in inflammation, is associated with persistent organ failure in patients with acute pancreatitis from the United States and Germany. Am J Gastroenterol 2010;105:2287–92.
    1. Keustermans GCE, Hoeks SBE, Meerding JM, et al. . Cytokine assays: An assessment of the preparation and treatment of blood and tissue samples. Methods 2013;61:10–7.
    1. Breiman L. Random Forests. Mach Learn 2001;45:5–32.
    1. Matthews BW. Comparison of the predicted and observed secondary structure of T4 phage lysozyme. Biochim Biophys Acta 1975;405:442–51.
    1. Aoun E, Chen J, Reighard D, et al. . Diagnostic accuracy of interleukin-6 and interleukin-8 in predicting severe acute pancreatitis: A meta-analysis. Pancreatology 2009;9:777–85.
    1. Malmstrom ML, Hansen MB, Andersen AM, et al. . Cytokines and organ failure in acute pancreatitis: Inflammatory response in acute pancreatitis. Pancreas 2012;41:271–7.
    1. Koutroumpakis E, Wu BU, Bakker OJ, et al. . Admission hematocrit and rise in blood urea nitrogen at 24 h outperform other laboratory markers in predicting persistent organ failure and pancreatic necrosis in acute pancreatitis: A post hoc analysis of three large prospective databases. Am J Gastroenterol 2015;110:1707–16.
    1. Buddingh KT, Koudstaal LG, van Santvoort HC, et al. . Early angiopoietin-2 levels after onset predict the advent of severe pancreatitis, multiple organ failure, and infectious complications in patients with acute pancreatitis. J Am Coll Surg 2014;218:26–32.
    1. Garg PK, Singh VP. Organ failure due to systemic injury in acute pancreatitis. Gastroenterology 2019;156:2008–23.
    1. Dabitao D, Margolick JB, Lopez J, et al. . Multiplex measurement of proinflammatory cytokines in human serum: Comparison of the Meso Scale discovery electrochemiluminescence assay and the cytometric bead array. J Immunol Methods 2011;372:71–7.
    1. Burnham KP, Anderson DR. Model Selection and Multimodel Inference. Chapter 1. Springer-Verlag New York, 2002, pp 49–97.
    1. Panch T, Mattie H, Celi LA. The “inconvenient truth” about AI in healthcare. NPJ Digit Med 2019;2:77.
    1. Fischer SK, Williams K, Wang L, et al. . Development of an IL-6 point-of-care assay: Utility for real-time monitoring and management of cytokine release syndrome and sepsis. Bioanalysis 2019;11:1777–85.

Source: PubMed

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