CT radiomic features for predicting resectability of oesophageal squamous cell carcinoma as given by feature analysis: a case control study

Jing Ou, Rui Li, Rui Zeng, Chang-Qiang Wu, Yong Chen, Tian-Wu Chen, Xiao-Ming Zhang, Lan Wu, Yu Jiang, Jian-Qiong Yang, Jin-Ming Cao, Sun Tang, Meng-Jie Tang, Jiani Hu, Jing Ou, Rui Li, Rui Zeng, Chang-Qiang Wu, Yong Chen, Tian-Wu Chen, Xiao-Ming Zhang, Lan Wu, Yu Jiang, Jian-Qiong Yang, Jin-Ming Cao, Sun Tang, Meng-Jie Tang, Jiani Hu

Abstract

Background: Computed tomography (CT) is commonly used in all stages of oesophageal squamous cell carcinoma (SCC) management. Compared to basic CT features, CT radiomic features can objectively obtain more information about intratumour heterogeneity. Although CT radiomics has been proved useful for predicting treatment response to chemoradiotherapy in oesophageal cancer, the best way to use CT radiomic biomarkers as predictive markers for determining resectability of oesophageal SCC remains to be developed. This study aimed to develop CT radiomic features related to resectability of oesophageal SCC with five predictive models and to determine the most predictive model.

Methods: Five hundred ninety-one patients with oesophageal SCC undergoing contrast-enhanced CT were enrolled in this study, and were composed by 270 resectable cases and 321 unresectable cases. Of the 270 resectable oesophageal SCCs, 91 cases were primary resectable tumours; and the remained 179 cases received neoadjuvant therapy after CT, shrank on therapy, and changed to resectable tumours. Four hundred thirteen oesophageal SCCs including 189 resectable cancers and 224 unresectable cancers were randomly allocated to the training cohort; and 178 oesophageal SCCs including 81 resectable tumours and 97 unresectable tumours were allocated to the validation group. Four hundred ninety-five radiomic features were extracted from CT data for identifying resectability of oesophageal SCC. Useful radiomic features were generated by dimension reduction using least absolute shrinkage and selection operator. The optimal radiomic features were chosen using multivariable logistic regression, random forest, support vector machine, X-Gradient boost and decision tree classifiers. Discriminating performance was assessed with area under receiver operating characteristic curve (AUC), accuracy and F-1score.

Results: Eight radiomic features were selected to create radiomic models related to resectability of oesophageal SCC (P-values < 0.01 for both cohorts). Multivariable logistic regression model showed the best performance (AUC = 0.92 ± 0.04 and 0.87 ± 0.02, accuracy = 0.87 and 0.86, and F-1score = 0.93 and 0.86 in training and validation cohorts, respectively) in comparison with any other model (P-value < 0.001). Good calibration was observed for multivariable logistic regression model.

Conclusion: CT radiomic models could help predict resectability of oesophageal SCC, and multivariable logistic regression model is the most predictive model.

Keywords: Computed tomography; Diagnosis; Esophagectomy; Esophagus; Squamous cell carcinoma.

Conflict of interest statement

The authors declare that they have no competing interests.

Figures

Fig. 1
Fig. 1
The CT data flow sequence in this research. Tumour contours are segmented manually by slice-by-slice delineating. In the training cohort, we select the extracted features depending on some rules. Based on the selected features, we build and validate the radiomic indicators. Ultimately, this research reveals that resectability of oesophageal squamous cell carcinoma is correlated with the radiomic indicators. LASSO, least absolute shrinkage and selection operator
Fig. 2
Fig. 2
The tumour contours are segmented manually on thoracic contrast-enhanced CT image
Fig. 3
Fig. 3
The least absolute shrinkage and selection operator (LASSO) binary logistic regression model used to select texture feature. a Tuning parameter (λ) selection in the LASSO model used 10-fold cross-validation via minimum criteria. The area under the receiver operating characteristic curve (AUC) is plotted versus log(λ). Dotted vertical lines are drawn at the optimal values by using the minimum criteria and the 1 standard error of the minimum criteria (the 1-SE criteria). log(λ) = −6.214, with λ chosen of 0.02. b LASSO coefficient profiles of the 483 texture features. A coefficient profile plot is produced against the log(λ) sequence. Vertical line is drawn at the value selected using 10-fold cross-validation, where optimal λ results in 42 non-zero coefficients
Fig. 4
Fig. 4
The receiver operating characteristic (ROC) curves of the multivariable logistic regression, random forest, support vector machine, X-Gradient boost, and decision tree demonstrate the determination of resectability of oesophageal squamous cell carcinoma in the validation cohort. XGboost = X-Gradient boost
Fig. 5
Fig. 5
Calibration curves of the multivariable logistic regression, random forest, support vector machine, X-Gradient boost, and decision tree are for the prediction of resectability of oesophageal squamous cell carcinoma in the validation cohort. Actual and Predicted represent real and predicted oesophageal squamous cell carcinoma resection rates, respectively. XGboost = X-Gradient boost

References

    1. Ferlay J, Soerjomataram I, Dikshit R, Eser S, Mathers C, Rebelo M, et al. Cancer incidence and mortality worldwide: sources, methods and major patterns in GLOBOCAN 2012. Int J Cancer. 2015;136:E359–E386.
    1. Torre LA, Bray F, Siegel RL, Ferlay J, Lortet-Tieulent J, Jemal A. Global cancer statistics, 2012. CA Cancer J Clin. 2015;65:87–108.
    1. Blum MA, Taketa T, Sudo K, Wadhwa R, Skinner HD, Ajani JA. Chemoradiation for esophageal cancer. Thorac Surg Clin. 2013;23:551–558. doi: 10.1016/j.thorsurg.2013.07.006.
    1. Kato H, Nakajima M. Treatments for esophageal cancer: a review. Gen Thorac Cardiovasc Surg. 2013;61:330–335. doi: 10.1007/s11748-013-0246-0.
    1. Umeoka S, Koyama T, Togashi K, Saga T, Watanabe G, Shimada Y, et al. Esophageal cancer: evaluation with triple-phase dynamic CT--initial experience. Radiology. 2006;239:777–783. doi: 10.1148/radiol.2393050222.
    1. Wu LF, Wang BZ, Feng JL, Cheng WR, Liu GR, Xu XH, et al. Preoperative TN staging of esophageal cancer: comparison of miniprobe ultrasonography, spiral CT and MRI. World J Gastroenterol. 2003;9:219–224. doi: 10.3748/wjg.v9.i2.219.
    1. Lambin P, Rios-Velazquez E, Leijenaar R, Carvalho S, van Stiphout RG, Granton P, et al. Radiomics: extracting more information from medical images using advanced feature analysis. Eur J Cancer. 2012;48:441–446. doi: 10.1016/j.ejca.2011.11.036.
    1. Gillies RJ, Kinahan PE, Hricak H. Radiomics: images are more than pictures, they are data. Radiology. 2016;278:563–577. doi: 10.1148/radiol.2015151169.
    1. Coroller TP, Grossmann P, Hou Y, Rios Velazquez E, Leijenaar RT, Hermann G, et al. CT-based radiomic signature predicts distant metastasis in lung adenocarcinoma. Radiother Oncol. 2015;114:345–350. doi: 10.1016/j.radonc.2015.02.015.
    1. Huang YQ, Liang CH, He L, Tian J, Liang CS, Chen X, et al. Development and validation of a radiomics nomogram for preoperative prediction of lymph node metastasis in colorectal cancer. J Clin Oncol. 2016;34:2157–2164. doi: 10.1200/JCO.2015.65.9128.
    1. Liang C, Huang Y, He L, Chen X, Ma Z, Dong D, et al. The development and validation of a CT-based radiomics signature for the preoperative discrimination of stage I–II and stage III–IV colorectal cancer. Oncotarget. 2016;7:31401–31412.
    1. Hou Z, Ren W, Li S, Liu J, Sun Y, Yan J, et al. Radiomic analysis in contrast-enhanced CT: predict treatment response to chemoradiotherapy in esophageal carcinoma. Oncotarget. 2017;8:104444–104454.
    1. Paul D, Su R, Romain M, Sébastien V, Pierre V, Isabelle G. Feature selection for outcome prediction in oesophageal cancer using genetic algorithm and random forest classifier. Comput Med Imaging Graph. 2017;60:42–49. doi: 10.1016/j.compmedimag.2016.12.002.
    1. Ajani JA, D’Amico TA, Baggstrom M, Bentrem DJ, Chao J, Corevera C, et al. NCCN Clinical Practice Guidelines in Oncology: esophageal and esophagogastric junction cancers. Version 2.2018. . Accessed May 2018.
    1. Chen Y, Chen TW, Wu CQ, Lin Q, Hu R, Xie C, et al. Radiomics model of contrast-enhanced computed tomography for predicting the recurrence of acute pancreatitis. Eur Radiol. 2019;29:4408–4417. doi: 10.1007/s00330-018-5824-1.
    1. Zhang L, Fried DV, Fave XJ, Hunter LA, Yang J, Court LE. IBEX: an open infrastructure software platform to facilitate collaborative work in radiomics. Med Phys. 2015;42:1341–1353. doi: 10.1118/1.4908210.
    1. Moss AA, Schnyder P, Thoeni RF, Margulis AR. Esophageal carcinoma: pretherapy staging by computed tomography. AJR Am J Roentgenol. 1981;136:1051–1056. doi: 10.2214/ajr.136.6.1051.
    1. Vallières M, Freeman CR, Skamene SR, El Naqa I. A radiomics model from joint FDG-PET and MRI texture features for the prediction of lung metastases in soft-tissue sarcomas of the extremities. Phys Med Biol. 2015;60:5471–5496. doi: 10.1088/0031-9155/60/14/5471.
    1. Abdi H, Williams LJ. Normalizing data. Encyclopedia of research design. Thousand Oaks: Sage; 2010. pp. 935–938.
    1. Ng F, Ganeshan B, Kozarski R, Miles KA, Goh V. Assessment of primary colorectal cancer heterogeneity by using whole-tumor texture analysis: contrast-enhanced CT texture as a biomarker of 5-year survival. Radiology. 2013;266:177–184. doi: 10.1148/radiol.12120254.
    1. Sauerbrei W, Royston P, Binder H. Selection of important variables and determination of functional form for continuous predictors in multivariable model building. Stat Med. 2007;26:5512–5528. doi: 10.1002/sim.3148.
    1. Kramer AA, Zimmerman JE. Assessing the calibration of mortality benchmarks in critical care: the Hosmer-Lemeshow test revisited. Crit Care Med. 2007;35:2052–2056. doi: 10.1097/01.CCM.0000275267.64078.B0.
    1. Shrout PE, Fleiss JL. Intraclass correlations: uses in assessing rater reliability. Psychol Bull. 1979;86:420–428. doi: 10.1037/0033-2909.86.2.420.
    1. Yip C, Davnall F, Kozarski R, Landau DB, Cook GJ, Ross P, et al. Assessment of changes in tumor heterogeneity following neoadjuvant chemotherapy in primary esophageal cancer. Dis Esophagus. 2015;28:172–179. doi: 10.1111/dote.12170.
    1. Hou X, Liang RB, Wei JC, Xu Y, Fu JH, Luo RZ, et al. Cyclin D1 expression predicts postoperative distant metastasis and survival in resectable esophageal squamous cell carcinoma. Oncotarget. 2016;7:31088–31096.
    1. Sui P, Hu P, Zhang T, Zhang X, Liu Q, Du J. High expression of CXCR-2 correlates with lymph node metastasis and predicts unfavorable prognosis in resected esophageal carcinoma. Med Oncol. 2014;31:809. doi: 10.1007/s12032-013-0809-z.
    1. Mazurowski MA. Radiogenomics: what it is and why it is important. J Am Coll Radiol. 2015;12:862–866. doi: 10.1016/j.jacr.2015.04.019.

Source: PubMed

3
Předplatit