Robust continuous in vitro culture of the Plasmodium cynomolgi erythrocytic stages

Adeline C Y Chua, Jessica Jie Ying Ong, Benoit Malleret, Rossarin Suwanarusk, Varakorn Kosaisavee, Anne-Marie Zeeman, Caitlin A Cooper, Kevin S W Tan, Rou Zhang, Bee Huat Tan, Siti Nurdiana Abas, Andy Yip, Anne Elliot, Chester J Joyner, Jee Sun Cho, Kate Breyer, Szczepan Baran, Amber Lange, Steven P Maher, François Nosten, Christophe Bodenreider, Bryan K S Yeung, Dominique Mazier, Mary R Galinski, Nathalie Dereuddre-Bosquet, Roger Le Grand, Clemens H M Kocken, Laurent Rénia, Dennis E Kyle, Thierry T Diagana, Georges Snounou, Bruce Russell, Pablo Bifani, Adeline C Y Chua, Jessica Jie Ying Ong, Benoit Malleret, Rossarin Suwanarusk, Varakorn Kosaisavee, Anne-Marie Zeeman, Caitlin A Cooper, Kevin S W Tan, Rou Zhang, Bee Huat Tan, Siti Nurdiana Abas, Andy Yip, Anne Elliot, Chester J Joyner, Jee Sun Cho, Kate Breyer, Szczepan Baran, Amber Lange, Steven P Maher, François Nosten, Christophe Bodenreider, Bryan K S Yeung, Dominique Mazier, Mary R Galinski, Nathalie Dereuddre-Bosquet, Roger Le Grand, Clemens H M Kocken, Laurent Rénia, Dennis E Kyle, Thierry T Diagana, Georges Snounou, Bruce Russell, Pablo Bifani

Abstract

The ability to culture pathogenic organisms substantially enhances the quest for fundamental knowledge and the development of vaccines and drugs. Thus, the elaboration of a protocol for the in vitro cultivation of the erythrocytic stages of Plasmodium falciparum revolutionized research on this important parasite. However, for P. vivax, the most widely distributed and difficult to treat malaria parasite, a strict preference for reticulocytes thwarts efforts to maintain it in vitro. Cultivation of P. cynomolgi, a macaque-infecting species phylogenetically close to P. vivax, was briefly reported in the early 1980s, but not pursued further. Here, we define the conditions under which P. cynomolgi can be adapted to long term in vitro culture to yield parasites that share many of the morphological and phenotypic features of P. vivax. We further validate the potential of this culture system for high-throughput screening to prime and accelerate anti-P. vivax drug discovery efforts.

Conflict of interest statement

A.C.Y.C., J.J.Y.O., B.H.T., S.N.A., A.Y., K.B., S.B., A.L., C.B., B.K.S.Y., T.T.D. and P.B were/are employed by and/or shareholders of Novartis Pharma AG. The remaining authors declare no competing interests.

Figures

Fig. 1
Fig. 1
Adaptation of P. cynomolgi Berok K4 line to continuous culture. a Schematic diagram of the successful adaptation of P. cynomolgi (Berok) from in vivo to in vitro culture. b Pilot ex vivo culture of P. cynomolgi Berok, B and M strain. The in vitro-cultured Berok K4 had to be sub-cultured at days 1, 3 and 5 due to robust growth, in contrast to the M and B strains where parasitaemias decreased to undetectable levels after day 3. cP. cynomolgi (Berok) in vitro culturing was further optimised to enable substantial multiplication (up to tenfold increase) that necessitated frequent dilution of the cultures when high parasitaemias were reached (red arrowheads). d Mature schizonts of culture adapted P. cynomolgi Berok K4 were enriched and allowed to re-invade fresh red blood cells that were then monitored every 2 h to document the complete asexual erythrocytic cycle in vitro. Scale bar represents 5 μm
Fig. 2
Fig. 2
Transmission study from P. cynomolgi Berok K4 continuous culture. a In vivo blood-stage parasitaemia in two rhesus monkeys infected with 100,000 P. cynomolgi Berok K4 sporozoites (because of the use of a log scale for parasitaemia, negative smears are shown as 0.0001% parasitaemia). Both monkeys became blood-stage patent on day 11 post infection (dpi). Arrows indicate drug treatment (black arrows: 5-day chloroquine treatment, red arrow: 7-day primaquine treatment). Monkey 1 was bled for stocks on day 15, and relapsed (measured as thin smear positivity) on days 31 and 52, after which it was treated with chloroquine and primaquine. Monkey 2 was bled on day 19 dpi, and did not relapse during the follow-up period of 102 dpi, after which it was treated with primaquine. b In vitro infection of primary rhesus hepatocytes with P. cynomolgi Berok K4 sporozoites produced both hypnozoites (left panel) and developing liver-stage schizonts (right panel). Cultures were fixed at day 6 dpi, and stained with anti-PcHsp70 and a secondary antibody labelled with Alexa 568 fluorescent dye. Nuclei were stained with DAPI. An average of 16 PE forms per 10,000 inoculated P. cynomolgi Berok K4 sporozoites were observed. Scale bar represents 50 μm. c The total PE forms of in vitro infection rate of various primary rhesus hepatocytes with P. cynomolgi M strain sporozoites and P. cynomolgi Berok K4 line sporozoites. d The percentage of hypnozoites observed in vitro using primary rhesus hepatocytes from different donors infected with P. cynomolgi M strain or P. cynomolgi Berok K4 line sporozoites. The data (c and d) were analysed using the Welch’s t test with the significance level set at P < 0.05. The histograms represent means (n = 3), and the error bars the standard error of the mean (SEM) of replicates
Fig. 3
Fig. 3
Phenotypic and rheological characterisation of the Berok K4 line from in vitro culture. aP. cynomolgi Berok K4-infected RBCs exhibit caveolae structures (yellow arrows) that are similar to those in P. vivax-infected RBCs (scanning electron microscopy, scale bars represent 1 µm and 100 nm for area shown at higher magnification in white box). b An atomic force microscope scan of trophozoite-infected human blood cells revealed caveolae occurred at lower frequency when compared with P. vivax. c, d The median (+ /- IQR) dimensions of these caveolae were similar (P. vivax n = 177, P. cynomolgi n = 91). e, f Amnis flow imaging clearly shows that the mature erythrocytic stages P. cynomolgi Berok K4; readily formed rosettes with uninfected red blood cells, which are also a key feature P. vivax (n = 5). g, h A dual micropipette aspiration method was used to demonstrate the rheological stability of the P. cynomolgi Berok K4 rosettes (n = 5). As observed in P. vivax, P. cynomolgi rosettes are tightly attached and the cells require around 400 pN to disrupt the adhesion. The non-parametric data resented in b, d, f and h were analysed using the Mann–Whitney U test with the significance level set at P < 0.05. The histograms and lines on box plots and scatter plots represent medians, and the error bars the interquartile range (IQR)
Fig. 4
Fig. 4
Drug susceptibility testing using P. cynomolgi Berok K4 in vitro culture. a Correlation of P. cynomolgi Berok K4 and P. falciparum IC50 values of common antimalarial reference compounds in a SYBR green I proliferation assay. The potency of the compounds was comparable between the two species, except for artemisinin, atovaquone and artesunate which were more potent in P. cynomolgi as compared with P. falciparum. A X = Y line indicates equal inhibition towards compound. b Heatmap showing IC50 (μM) of a representative set of compounds from the Malaria Box. Majority of the compounds showed activity against both P. falciparum and P. cynomolgi, except for six compounds—MMV008127, MMV006250, MMV008270, MMV000563, MMV007839 and MMV008294 which displayed an IC50 > 10 µM for P. cynomolgi, and < 5 µM for P. falciparum. c Heatmap showing percentage of inhibition of the 125 antimalarial compounds from the Pathogen Box in P. cynomolgi Berok K4 and P. falciparum in different serums and concentrations. Nine compounds (MMV676380, MMV023388, MMV026550, MMV007625, MMV023949, MMV007638, MMV676442, MMV006833 and MMV020289) showed more than fourfold difference in inhibition between P. cynomolgi Berok K4 and P. falciparum in their equivalent serums
Fig. 5
Fig. 5
Correlation of chloroquine IC50 of P. cynomolgi Berok K4 continuous culture with P. vivax clinical isolates. a Flow cytometry dot plots (Ethidium/Hoechst) of chloroquine-treated P. cynomolgi Berok K4 continuous culture gated for schizonts population. b IC50 determination of chloroquine in P. cynomolgi Berok K4 continuous culture using the schizont maturation assay (n = 3) with error bars representing standard deviation (SD). c IC50 determination of chloroquine in P. cynomolgi Berok K4 continuous culture using SYBR green I proliferation assay (n = 3) with error bars representing standard deviation (SD) d IC50 of chloroquine in P. cynomolgi Berok K4 continuous culture and P. vivax clinical isolates using the schizont maturation assay. The median ( + /− IQR) values for the IC50 of P. vivax clinical isolates and of P. cynomolgi Berok K4 continuous culture were similar. The non-parametric data in d was analysed using the Mann–Whitney U-Test with the significance level set at P < 0.05. The histograms and lines on box plots and scatter plots represent medians (P. vivax n = 10, P. cynomolgi n = 4) and the error bars the interquartile range (IQR)

References

    1. Trager W, Jensen JB. Human malaria parasites in continuous culture. Science. 1976;193:673–675. doi: 10.1126/science.781840.
    1. World Health Organization. World Malaria Report 2016 (World Health Organization, Geneva, 2016).
    1. Tachibana S, et al. Plasmodium cynomolgi genome sequences provide insight into Plasmodium vivax and the monkey malaria clade. Nat. Genet. 2012;44:1051–1055. doi: 10.1038/ng.2375.
    1. Pasini EM, et al. An improved Plasmodium cynomolgi genome assembly reveals an unexpected methyltransferase gene expansion. Wellcome Open Res. 2017;2:42. doi: 10.12688/wellcomeopenres.11864.1.
    1. Shortt HE, Garnham PC. Demonstration of a persisting exo-erythrocytic cycle in Plasmodium cynomolgi and its bearing on the production of relapses. Br. Med J. 1948;1:1225–1228. doi: 10.1136/bmj.1.4564.1225.
    1. Krotoski WA, et al. Observations on early and late post-sporozoite tissue stages in primate malaria. II. The hypnozoite of Plasmodium cynomolgi bastianellii from 3 to 105 days after infection, and detection of 36- to 40-hour pre-erythrocytic forms. Am. J. Trop. Med. Hyg. 1982;31:211–225. doi: 10.4269/ajtmh.1982.31.211.
    1. Krotoski WA, et al. Observations on early and late post-sporozoite tissue stages in primate malaria. I. Discovery of a new latent form of Plasmodium cynomolgi (the hypnozoite), and failure to detect hepatic forms within the first 24 hours after infection. Am. J. Trop. Med. Hyg. 1982;31:24–35. doi: 10.4269/ajtmh.1982.31.24.
    1. Schmidt LH, et al. Plasmodium cynomolgi infections in the rhesus monkey. Am. J. Trop. Med. Hyg. 1982;31:609–703. doi: 10.4269/ajtmh.1982.31.609.
    1. Deye GA, et al. Use of a rhesus Plasmodium cynomolgi model to screen for anti-hypnozoite activity of pharmaceutical substances. Am. J. Trop. Med. Hyg. 2012;86:931–935. doi: 10.4269/ajtmh.2012.11-0552.
    1. DiTusa C, et al. Causal prophylactic efficacy of primaquine, tafenoquine, and atovaquone-proguanil against Plasmodium cynomolgi in a rhesus monkey model. J. Parasitol. 2014;100:671–673. doi: 10.1645/13-480.1.
    1. Dembele L, et al. Towards an in vitro model of Plasmodium hypnozoites suitable for drug discovery. PloS One. 2011;6:e18162. doi: 10.1371/journal.pone.0018162.
    1. Dembele L, et al. Persistence and activation of malaria hypnozoites in long-term primary hepatocyte cultures. Nat. Med. 2014;20:307–312. doi: 10.1038/nm.3461.
    1. March S, et al. A microscale human liver platform that supports the hepatic stages of Plasmodium falciparum and vivax. Cell Host Microbe. 2013;14:104–115. doi: 10.1016/j.chom.2013.06.005.
    1. Hovlid ML, Winzeler EA. Phenotypic screens in antimalarial drug discovery. Trends Parasitol. 2016;32:697–707. doi: 10.1016/j.pt.2016.04.014.
    1. Nguyen-Dinh P, Gardner AL, Campbell CC, Skinner JC, Collins WE. Cultivation in vitro of the vivax-type malaria parasite Plasmodium cynomolgi. Science. 1981;212:1146–1148. doi: 10.1126/science.7233207.
    1. Zhou ZX, Li GR, Ye JS, Xi YH, Huang RZ. Continuous in vitro cultivation of erythrocytic Plasmodium cynomolgi. Chin. Med. J. 1984;97:84–88.
    1. Sutton PL, et al. Characterizing the genetic diversity of the monkey malaria parasite Plasmodium cynomolgi. Infect., Genet. Evol.: J. Mol. Epidemiol. Evolut. Genet. Infect. Dis. 2016;40:243–252. doi: 10.1016/j.meegid.2016.03.009.
    1. Okenu DM, et al. The reticulocyte binding proteins of Plasmodium cynomolgi: a model system for studies of P. vivax. Mol. Biochem. Parasitol. 2005;143:116–120. doi: 10.1016/j.molbiopara.2005.04.010.
    1. Galinski MR, Medina CC, Ingravallo P, Barnwell JW. A reticulocyte-binding protein complex of Plasmodium vivax merozoites. Cell. 1992;69:1213–1226. doi: 10.1016/0092-8674(92)90642-P.
    1. Zeeman AM, et al. PI4 kinase is a prophylactic but not radical curative target in Plasmodium vivax-type malaria parasites. Antimicrob. Agents Chemother. 2016;60:2858–2863. doi: 10.1128/AAC.03080-15.
    1. Akinyi S, et al. A 95 kDa protein of Plasmodium vivax and P. cynomolgi visualized by three-dimensional tomography in the caveola-vesicle complexes (Schuffner’s dots) of infected erythrocytes is a member of the PHIST family. Mol. Microbiol. 2012;84:816–831. doi: 10.1111/j.1365-2958.2012.08060.x.
    1. Lee WC, et al. Glycophorin C (CD236R) mediates vivax malaria parasite rosetting to normocytes. Blood. 2014;123:e100–e109. doi: 10.1182/blood-2013-12-541698.
    1. Russell BM, Cooke BM. The rheopathobiology of Plasmodium vivax and other important primate malaria parasites. Trends Parasitol. 2017;33:321–334. doi: 10.1016/j.pt.2016.11.009.
    1. Zhang R, et al. A basis for rapid clearance of circulating ring-stage malaria parasites by the spiroindolone KAE609. J. Infect. Dis. 2016;213:100–104. doi: 10.1093/infdis/jiv358.
    1. Plouffe D, et al. In silico activity profiling reveals the mechanism of action of antimalarials discovered in a high-throughput screen. Proc. Natl Acad. Sci. USA. 2008;105:9059–9064. doi: 10.1073/pnas.0802982105.
    1. White NJ, et al. Antimalarial activity of KAF156 in falciparum and vivax malaria. New Engl. J. Med. 2016;375:1152–1160. doi: 10.1056/NEJMoa1602250.
    1. Olliaro PL, et al. Implications of Plasmodium vivax biology for control, elimination, and research. Am. J. Trop. Med. Hyg. 2016;95:4–14. doi: 10.4269/ajtmh.16-0160.
    1. Bass CC, Johns FM. The cultivation of malarial Plasmodia (Plasmodium vivax and Plasmodium falciparum) in vitro. J. Exp. Med. 1912;16:567–579. doi: 10.1084/jem.16.4.567.
    1. Haynes JD, Diggs CL, Hines FA, Desjardins RE. Culture of human malaria parasites Plasmodium falciparum. Nature. 1976;263:767–769. doi: 10.1038/263767a0.
    1. Trigg PI. Recent advances in malaria parasite cultivation and their application to studies on host-parasite relationships: a review. Bull. World Health Organ. 1985;63:387–398.
    1. Kocken CH, et al. Plasmodium knowlesi provides a rapid in vitro and transfection system that enables double-crossover gene knockout studies. Infect. Immun. 2002;70:655–660. doi: 10.1128/IAI.70.2.655-660.2002.
    1. Moon RW, et al. Adaptation of the genetically tractable malaria pathogen Plasmodium knowlesi to continuous culture in human erythrocytes. Proc. Natl Acad. Sci. USA. 2013;110:531–536. doi: 10.1073/pnas.1216457110.
    1. Kosaisavee V, et al. Strict tropism for CD71(+)/CD234(+) human reticulocytes limits the zoonotic potential of Plasmodium cynomolgi. Blood. 2017;130:1357–1363. doi: 10.1182/blood-2017-02-764787.
    1. Collins WE, Warren M, Galland GG. Studies on infections with the Berok strain of Plasmodium cynomolgi in monkeys and mosquitoes. J. Parasitol. 1999;85:268–272. doi: 10.2307/3285631.
    1. Wells TN, Hooft van Huijsduijnen R, Van Voorhis WC. Malaria medicines: a glass half full? Nat. Rev. Drug Discov. 2015;14:424–442. doi: 10.1038/nrd4573.
    1. Phillips MA, et al. Malaria. Nat. Rev. Dis. Prim. 2017;3:17050. doi: 10.1038/nrdp.2017.50.
    1. Roth A, et al. A comprehensive model for assessment of liver stage therapies targeting Plasmodium vivax and Plasmodium falciparum. Nat. Commun. 2018;9:1837. doi: 10.1038/s41467-018-04221-9.
    1. Khetani SR, Bhatia SN. Microscale culture of human liver cells for drug development. Nat. Biotechnol. 2008;26:120–126. doi: 10.1038/nbt1361.
    1. March S, et al. Micropatterned coculture of primary human hepatocytes and supportive cells for the study of hepatotropic pathogens. Nat. Protoc. 2015;10:2027–2053. doi: 10.1038/nprot.2015.128.
    1. Ponnudurai T, et al. Infectivity of cultured Plasmodium falciparum gametocytes to mosquitoes. Parasitology. 1989;98(Pt 2):165–173. doi: 10.1017/S0031182000062065.
    1. Bennett GF, Warren M, Cheong WH. Biology of the simian malarias of southeast Asia. II. The susceptibility of some Malaysian mosquitoes to infection with five strains of Plasmodium cynomolgi. J. Parasitol. 1966;52:625–631. doi: 10.2307/3276417.
    1. Garnham PC. A new subspecies of Plasmodium cynomolgi. Rivista Di Parassitologia. 1959;20:273–278.
    1. Coatney GR, et al. Transmission of the M strain of Plasmodium cynomolgi to man. Am. J. Trop. Med. Hyg. 1961;10:673–678. doi: 10.4269/ajtmh.1961.10.673.
    1. Mulligan HW. Descriptions of two species of monkey Plasmodium isolated from Silenus irus. Arch. f. Protist. 1935;84:285–314.
    1. Moll, K., Ljungström, I., Perlmann, H., Scherf, A. & Wahlgren M. Methods In MalariaResearch 5th edn (BioMalPar, Manassas, VA, 2008).
    1. Emerson R. & Held, A. A. Aqualinderella fermentans gen. et sp. n., a phycomycete adapted to stagnant waters. II. isolation, cultural characteristics, and gas relations. Am. J. Bot.56, 1103-1120 (1969).
    1. Schuster FL. Cultivation of Plasmodium spp. Clin. Microbiol. Rev. 2002;15:355–364. doi: 10.1128/CMR.15.3.355-364.2002.
    1. Zeeman AM, et al. KAI407, a potent non-8-aminoquinoline compound that kills Plasmodium cynomolgi early dormant liver stage parasites in vitro. Antimicrob. Agents Chemother. 2014;58:1586–1595. doi: 10.1128/AAC.01927-13.
    1. Hochmuth RM. Micropipette aspiration of living cells. J. Biomech. 2000;33:15–22. doi: 10.1016/S0021-9290(99)00175-X.
    1. Nash GB, Cooke BM, Carlson J, Wahlgren M. Rheological properties of rosettes formed by red blood cells parasitized by Plasmodium falciparum. Br. J. Haematol. 1992;82:757–763. doi: 10.1111/j.1365-2141.1992.tb06955.x.
    1. Malleret B, et al. Significant biochemical, biophysical and metabolic diversity in circulating human cord blood reticulocytes. PloS One. 2013;8:e76062. doi: 10.1371/journal.pone.0076062.
    1. Lee YQ, et al. A high-content phenotypic screen reveals the disruptive potency of quinacrine and 3’,4’-dichlorobenzamil on the digestive vacuole of Plasmodium falciparum. Antimicrob. Agents Chemother. 2014;58:550–558. doi: 10.1128/AAC.01441-13.
    1. Malleret B, et al. A rapid and robust tri-color flow cytometry assay for monitoring malaria parasite development. Sci. Rep. 2011;1:118. doi: 10.1038/srep00118.
    1. Lim MYX, et al. UDP-galactose and acetyl-coA transporters as Plasmodium multidrug resistance genes. Nat. Microbiol. 2016;1:161–166. doi: 10.1038/nmicrobiol.2016.166.
    1. Spangenberg T, et al. The open access malaria box: a drug discovery catalyst for neglected diseases. PloS One. 2013;8:e62906. doi: 10.1371/journal.pone.0062906.
    1. McNamara CW, et al. Targeting Plasmodium PI(4)K to eliminate malaria. Nature. 2013;504:248–253. doi: 10.1038/nature12782.
    1. Meister S, et al. Imaging of Plasmodium liver stages to drive next-generation antimalarial drug discovery. Science. 2011;334:1372–1377. doi: 10.1126/science.1211936.
    1. Rottmann M, et al. Spiroindolones, a potent compound class for the treatment of malaria. Science. 2010;329:1175–1180. doi: 10.1126/science.1193225.
    1. Swann J, et al. High-throughput luciferase-based assay for the discovery of therapeutics that prevent malaria. ACS Infect. Dis. 2016;2:281–293. doi: 10.1021/acsinfecdis.5b00143.
    1. Plouffe DM, et al. High-throughput assay and discovery of small molecules that interrupt malaria transmission. Cell Host Microbe. 2016;19:114–126. doi: 10.1016/j.chom.2015.12.001.
    1. Gamo FJ, et al. Thousands of chemical starting points for antimalarial lead identification. Nature. 2010;465:305–310. doi: 10.1038/nature09107.
    1. Baragana B, et al. A novel multiple-stage antimalarial agent that inhibits protein synthesis. Nature. 2015;522:315–320. doi: 10.1038/nature14451.
    1. Avery VM, et al. Screening and hit evaluation of a chemical library against blood-stage Plasmodium falciparum. Malar. J. 2014;13:190. doi: 10.1186/1475-2875-13-190.
    1. Zhang JH, Chung TD, Oldenburg KR. A simple statistical parameter for use in evaluation and validation of high throughput screening assays. J. Biomol. Screen. 1999;4:67–73. doi: 10.1177/108705719900400206.
    1. Sharrock WW, et al. Plasmodium vivax trophozoites insensitive to chloroquine. Malar. J. 2008;7:94. doi: 10.1186/1475-2875-7-94.
    1. Russell B, et al. Determinants of in vitro drug susceptibility testing of Plasmodium vivax. Antimicrob. Agents Chemother. 2008;52:1040–1045. doi: 10.1128/AAC.01334-07.

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