Study of Human Microbiota in Healthy and Pathological Conditions (MicroSP)
The aim of the present study is to characterize the bacterial composition (microbiota) colonizing to the human body in different physio - pathological conditions (lifestyle, motor activity, surgical operations, probiotic and prebiotic consumption, antibiotic therapies, chemotherapeutic therapies), nervous and musculoskeletal diseases, gastrointestinal and metabolic disorders , oral and vaginal diseases, etc.). In particular, they will be investigate:
- the changes in the bacterial abundance
- the potential microbial interactions with the human host
- the microbial networks describing on the bacterial interactions within a specific composition of the human microbiota
Study Overview
Status
Status
Conditions
Conditions
Intervention / Treatment
Intervention / Treatment
Detailed Description
The main objective of this study is to deepen the knowledge about the bacterial communities associated to the human organism. In particular, the present study aims to evaluate how the microbiota (intestinal, cutaneous, vaginal, nasal, bronchial, breast milk, salivary, oral, etc.) is subject to quantitative and qualitative changes consequently to different events involving the human host. The project trys to highlight which microorganisms may be involved in the onset or progression of certain pathological condition, as well as to identify which bacterial genera can be more subject to variations due to specific non-pathological events.
Secondary objectives of this study are:
- To define a "healthy microbiome", that is to understand which are the main bacteria that commonly compose the human microbiome in physiological conditions, differentiating it from that present in certain pathological conditions.
- To characterize the physiological effects that bacterial changes of the human microbiota have on the host.
- To evaluate whether the use of probiotics, prebiotics, dietary and nutritional factors, cosmetics, and oral, nasal, vaginal, or pharmacological therapies of any kind can influence the microbial network of the human microbiota associated to different body districts.
Study Type
Study Type
Enrollment (Anticipated)
Enrollment
Contacts and Locations
Study Locations
-
-
MI
-
Milan, MI, Italy, 20161
- IRCCS Istituto Ortopedico Galeazzi
-
-
Participation Criteria
Eligibility Criteria
Eligibility Criteria
Ages Eligible for Study
Accepts Healthy Volunteers
Genders Eligible for Study
Sampling Method
Study Population
For each cohoort 15 healthy subjects will be enrolled (controls), for a total of 90 subjects.
The study involves the recruitment of 180 subjects (90 pathological and 90 healthy and recruited
Description
Inclusion Criteria:
- subjects suffering from neurological/behavioral diseases;
- subjects suffering of bone diseases;
- subjects affected of dysmetabolic / or endocrine disorders;
- subjects with physical activities at a competitive level;
- subjects affected of gastrointestinal disorders;
- subjects with prolonged antibiotic therapies and undergoing surgery
Exclusion Criteria:
- no use of probiotics in the month prior the sampling;
- no use of antibiotics in the month prior the sampling;
- no consumption of yogurt in the month prior the sampling;
Study Plan
How is the study designed?
Design Details
Number of groups / cohorts
Cohorts and Interventions
Group / CohortGroup / Cohort |
Intervention / TreatmentIntervention / Treatment |
|---|---|
|
Neurological and behavioral disorders
Subjects with neurological or behavioral disorders such as Tourette syndrome are enrolled.
|
To evaluate the effects of a specific event (i.e.
surgical operation) or therapy (i.e antibiotic treatment) over time;
Other Names:
|
|
Subjects affected by bone diseases
Subjects affected by bone diseases such as infective osteomyelitis or osteoporosis are enrolled.
|
To evaluate the effects of a specific event (i.e.
surgical operation) or therapy (i.e antibiotic treatment) over time;
Other Names:
|
|
Dysmetabolic and/or endocrine disorders
Patients with endocrine disorders, such as thyroid disfunctions, or with metabolic disorders, including diabetes mellitus,are enrolled.
|
|
|
Subjects performing agonistic activity
Subjects performing physical activity at agonistic level are enrolled.
|
|
|
Gastroenteric disorders
Subjects affected by gastric and/or enteric disorders are enrolled.
|
|
|
Prolonged antibiotic therapy
Patients subjected to prolonged antibiotic therapies and undergone a variety of surgical procedures are enrolled.
|
To evaluate the effects of a specific event (i.e.
surgical operation) or therapy (i.e antibiotic treatment) over time;
Other Names:
|
|
Healthy subjects
Subjects without any known ongoing disease are enrolled.
|
What is the study measuring?
Primary Outcome Measures
Primary Outcome Measures
Outcome Measure |
Measure Description |
Time Frame |
|---|---|---|
|
Bacterial abundances calculated by mean of Operational Taxonomic Unit (OTU) count
Time Frame: Up to 24 weeks
|
It is a measure of the bacterial amount
|
Up to 24 weeks
|
Secondary Outcome Measures
Secondary Outcome Measures
Outcome Measure |
Measure Description |
Time Frame |
|---|---|---|
|
Chao's indices estimated on the total OTU amount
Time Frame: Up to 24 weeks
|
It is a measure of bacterial diversity
|
Up to 24 weeks
|
|
Simpson's index (D) estimated on the total OTU amount
Time Frame: Up to 24 weeks
|
It is a measure of bacterial diversity
|
Up to 24 weeks
|
|
Shannon's index estimated on the total OTU amount
Time Frame: Up to 24 weeks
|
It is a measure of bacterial diversity
|
Up to 24 weeks
|
|
The OTU abundances will be used to calculate an adjacency matrix based on the Spearman's correlation coefficient (rs) among different bacterial genus
Time Frame: up to 24 weeks
|
It is a measure of strength of linear association between different bacterial genera
|
up to 24 weeks
|
Collaborators and Investigators
Sponsor
Sponsor
Investigators
Investigators
- Principal Investigator: Lorenzo Drago, Prof., IRCCS Galeazzi Orthopedic Institute, Milan, Italy
Study record dates
Study Major Dates
Study Start (Actual)
Study Start
Primary Completion (Actual)
Primary Completion
Study Completion (Anticipated)
Study Completion
Study Registration Dates
First Submitted
First Submitted
First Submitted That Met QC Criteria
First Submitted That Met QC Criteria
First Posted (Actual)
First Posted
Study Record Updates
Last Update Posted (Actual)
Last Update Posted
Last Update Submitted That Met QC Criteria
Last Update Submitted That Met QC Criteria
Last Verified
Last Verified
More Information
Terms related to this study
Keywords
Additional Relevant MeSH Terms
Other Study ID Numbers
Other Study ID Numbers
- MiscoSP
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