GEnomic Medicine in Kidney Transplantation Study (GEM-KiT)
Investigator led, prospective, observational cohort study to detect genomic features which can predict outcomes following kidney transplantation.
- Determine non-HLA genomic mismatches between donor-recipient pairs which impact kidney allograft survival following transplantation
- Derive polygenic risk scores on pre-transplant blood and/or kidney biopsy samples which predict kidney allograft dysfunction
- Derive polygenic risk scores on post-transplant blood and/or kidney biopsy samples which predict kidney allograft dysfunction
Study Overview
Status
Status
Conditions
Conditions
Intervention / Treatment
Intervention / Treatment
Study Type
Study Type
Enrollment (Estimated)
Enrollment
Contacts and Locations
Study Contact
Study Contact
- Name: Jennifer SY Li, MBBS, FRACP
- Phone Number: 612 88905555
- Email: jennifer.li@health.nsw.gov.au
Study Contact Backup
- Name: Philip J O'Connell, MBBS, FRACP
- Phone Number: 612 88905555
- Email: philip.oconnell@sydney.edu.au
Participation Criteria
Eligibility Criteria
Eligibility Criteria
Ages Eligible for Study
- Adult
- Older Adult
Accepts Healthy Volunteers
Sampling Method
Study Population
Description
Inclusion Criteria: All participants included in the study must be age ≥ 18 years old at time of enrolment and
- able to provide informed consent (interpreter permitted) for enrolment
- consenting to longitudinal follow up (can withdraw post enrolment)
- consenting to provide samples for biobanking, including blood, urine, faecal and/or kidney biopsy tissue (collected prospectively, separate to routine care)
Exclusion Criteria: Patients will be excluded from the study if they are
- unable (or unwilling) to provide consent, or
- have life-expectancy less than 6-months, or
- have received a haematopoietic stem cell transplant in the past 5 years.
Study Plan
How is the study designed?
Design Details
Number of groups / cohorts
Cohorts and Interventions
Group / CohortGroup / Cohort |
Intervention / TreatmentIntervention / Treatment |
|---|---|
|
Kidney Transplant Recipients
Enrolled at time of transplant or post transplant
|
Biomarker discovery and validation - with focus on genomic biomarkers
|
What is the study measuring?
Primary Outcome Measures
Primary Outcome Measures
Outcome Measure |
Measure Description |
Time Frame |
|---|---|---|
|
Death censored graft loss (DCGL)
Time Frame: At biopsy or during study follow up after biopsy (expected average over 60-months)
|
Loss of functioning kidney transplant (not counted if patient died with functioning graft)
|
At biopsy or during study follow up after biopsy (expected average over 60-months)
|
|
Biopsy proven rejection (BPAR)
Time Frame: At biopsy or during study follow up after biopsy (expected average 12-months)
|
Rejection diagnosed on kidney transplant biopsy
|
At biopsy or during study follow up after biopsy (expected average 12-months)
|
Secondary Outcome Measures
Secondary Outcome Measures
Outcome Measure |
Measure Description |
Time Frame |
|---|---|---|
|
Kidney biopsy transcriptomic signature
Time Frame: At biopsy - based on collected tissue sample
|
Based on bulk and/or spatial transcriptomic experiments
|
At biopsy - based on collected tissue sample
|
|
Kidney cell type composition
Time Frame: At biopsy - based on collected tissue sample
|
Cell type phenotyping of immune and kidney cell types
|
At biopsy - based on collected tissue sample
|
|
Treatment resistant rejection
Time Frame: At biopsy or during study follow up after biopsy (expected average 12-months)
|
Persistent rejection despite additional glucocorticoids and/or upscaling of maintenance immunosuppression
|
At biopsy or during study follow up after biopsy (expected average 12-months)
|
|
All cause graft loss
Time Frame: At biopsy or during study follow up after biopsy (expected average over 60-months)
|
DCGL or death with functioning graft
|
At biopsy or during study follow up after biopsy (expected average over 60-months)
|
|
Death
Time Frame: Any time during or after biopsy (expected over 60-months)
|
Death
|
Any time during or after biopsy (expected over 60-months)
|
|
Hospital admission or emergency attendance
Time Frame: At biopsy or during study follow up after biopsy (expected average 12-months)
|
Hospital admission or emergency department visit for any reason
|
At biopsy or during study follow up after biopsy (expected average 12-months)
|
|
Delayed Graft Function (DGF)
Time Frame: within the first 7 days post transplantation
|
Need for dialysis within the first 7 days post transplantation
|
within the first 7 days post transplantation
|
|
Kidney function
Time Frame: Months 1, 3, 12, 24, 36, 48, 60, 120 post transplantation
|
serum creatinine and eGFR post transplantation
|
Months 1, 3, 12, 24, 36, 48, 60, 120 post transplantation
|
|
Albuminuria
Time Frame: Months 1, 3, 12 any time after 12-months trnasplantation
|
albumin in the urine (UACR)
|
Months 1, 3, 12 any time after 12-months trnasplantation
|
|
Surrogate end-point markers
Time Frame: Months 3, 12, 24, 36, 48 and 60, 120 post transplantation
|
eGFR slope and iBOX scores
|
Months 3, 12, 24, 36, 48 and 60, 120 post transplantation
|
|
Borderline rejeciton
Time Frame: At biopsy or during study follow up after biopsy (expected average 12-months)
|
Based on banff scoring criteria for kidney biospies
|
At biopsy or during study follow up after biopsy (expected average 12-months)
|
|
chronic rejection; chronic transplant glomerulopathy; and interstitial fibrosis and tubular atrophy (IFTA) scores
Time Frame: At biopsy or during study follow up after biopsy (expected average over 12-months)
|
Based on banff scoring for kidney biopsies
|
At biopsy or during study follow up after biopsy (expected average over 12-months)
|
|
Recurrent disease
Time Frame: At biopsy or during study follow up after biopsy (expected average 60-months)
|
recurrence of original disease causing kidney failure
|
At biopsy or during study follow up after biopsy (expected average 60-months)
|
|
BK virus complications
Time Frame: At biopsy or during study follow up after biopsy (expected average 12-months)
|
Viremia or virus associated nephropathy
|
At biopsy or during study follow up after biopsy (expected average 12-months)
|
|
Major cardiovascular complications
Time Frame: At biopsy or during study follow up after biopsy (expected average 60-months)
|
3-point MACE: non fatal stroke, non fatal myocardial infarction, cardiovascular death
|
At biopsy or during study follow up after biopsy (expected average 60-months)
|
|
Major infectious complications
Time Frame: At biopsy or during study follow up after biopsy (expected average 60-months)
|
any major fungal, bacterial or viral infection
|
At biopsy or during study follow up after biopsy (expected average 60-months)
|
|
Malignancy post transplantation
Time Frame: At biopsy or during study follow up after biopsy (expected average 60-months)
|
any cancer type
|
At biopsy or during study follow up after biopsy (expected average 60-months)
|
|
Proteinomic signature
Time Frame: At biopsy or during study follow up after biopsy (expected average 12-months)
|
mass spectrometry or spatial proteinomic results
|
At biopsy or during study follow up after biopsy (expected average 12-months)
|
Collaborators and Investigators
Sponsor
Sponsor
Study record dates
Study Major Dates
Study Start (Estimated)
Study Start
Primary Completion (Estimated)
Primary Completion
Study Completion (Estimated)
Study Completion
Study Registration Dates
First Submitted
First Submitted
First Submitted That Met QC Criteria
First Submitted That Met QC Criteria
First Posted (Actual)
First Posted
Study Record Updates
Last Update Posted (Actual)
Last Update Posted
Last Update Submitted That Met QC Criteria
Last Update Submitted That Met QC Criteria
Last Verified
Last Verified
More Information
Terms related to this study
Other Study ID Numbers
Other Study ID Numbers
- GEM-KiT
Plan for Individual participant data (IPD)
Plan to Share Individual Participant Data (IPD)?
Drug and device information, study documents
Studies a U.S. FDA-regulated drug product
Studies a U.S. FDA-regulated device product
product manufactured in and exported from the U.S.
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