Gene Expression Objective Definition of Early Sepsis In Children (GEODESIC)

January 21, 2024 updated by: Seattle Children's Hospital
GEODESIC is a prospective descriptive cohort investigation that will examine the generalizability of the novel host gene expression biomarkers, SeptiCyteTM LAB, SeptiCyteTM VIRUS, SeptiCyteTM BACT, and SeptiCyteTM TRIAGE (collectively 18 genes or SeptiCyteTM LVBT) and SeptiCyteTM RAPID, for differentiating children with bacterial sepsis, versus severe viral illness, versus non-infectious related systemic inflammatory response syndrome.

Study Overview

Detailed Description

Specific Aim 1. Validate the robustness of the SeptiCyteTM LVBT gene expression signatures for providing clear discrimination between critically ill children with bacterial sepsis versus severe viral illness versus infection-negative systemic inflammation (INSI) secondary to a variety of etiologies.

Approach: We will expand our previous Genotypes And Phenotypes in Pediatric SIRS and Sepsis (GAPPSS) INSI cohort to children with recent trauma, thermal burns, anoxic-ischemic reperfusion events, exposure to cardiopulmonary bypass, extracorporeal life support, or dialytic therapy, CAR-T cell therapy, and various rheumatologic diagnoses. e we will recruit children with bacterial and viral infection who demonstrate a spectrum of illness severity and organ dysfunction. This specific aim will demonstrate the generalizability of SeptiCyteTM LVBT among critically children with life-threatening infectious disease or INSI.

Specific Aim 2. Determine if SeptiCyteTM LVBT gene expression signatures trend towards resolution of previously induced or suppressed gene expression states as critical illness resolves.

Approach: We will obtain paired blood samples for SeptiCyteTM LVBT gene expression, the first around the time of intensive care unit (ICU) admission (critically ill) and the second at ICU discharge approximately 48 hours later (transition to acute care). Resolution of critical illness will be quantified by serial daily measures of composite organ dysfunction.

Specific Aim 3. Ascertain that performance of SeptiCyteTM RAPID utilizing a point of care device at Seattle Children's will be equivalent to centralized assessment using SeptiCyteTM LAB.

Approach: Blood samples will be processed on site (Seattle Children's) for SeptiCyte RAPID testing. SeptiCyteTM RAPID is the result of the translation of the SeptiCyteTM LAB test to the cartridge-based Biocartis Idylla™ platform.

Study Type

Observational

Enrollment (Actual)

100

Contacts and Locations

This section provides the contact details for those conducting the study, and information on where this study is being conducted.

Study Locations

    • Washington
      • Seattle, Washington, United States, 98105
        • Seattle Children's Hospital
      • Seattle, Washington, United States, 98105
        • Seattle Children's Hospital, Harborview Medical Center

Participation Criteria

Researchers look for people who fit a certain description, called eligibility criteria. Some examples of these criteria are a person's general health condition or prior treatments.

Eligibility Criteria

Ages Eligible for Study

  • Child

Accepts Healthy Volunteers

No

Sampling Method

Probability Sample

Study Population

Critically ill children with systemic inflammatory response secondary to bacterial or viral sepsis or non-infectious SIRS

Description

Inclusion Criteria:

INSI Cohort

  • Admitted to the PICU
  • New severe trauma OR
  • New thermal burns OR
  • Rheumatologic diagnoses OR
  • Post-initiation (or circuit change) of extracorporeal life support OR
  • Post anoxic-ischemic-reperfusion insults OR
  • Infants undergoing cardiac surgery with cardiopulmonary bypass OR
  • CAR-T cell therapy
  • Parents speak English or Spanish AND
  • Not previously enrolled in the GEODESIC investigation

Pediatric Bacterial Sepsis Cohort

  • Admitted to the PICU
  • Parents speak English or Spanish AND
  • Exhibit SIRS criteria including at least fever/hypothermia or leukocytosis/leukopenia or left shift on the leukocyte differential AND
  • Strongly suspected or documented source of bacterial infection per primary care team
  • Not previously enrolled in the GEODESIC investigation

Pediatric Bacterial Sepsis Cohort

  • Admitted to the PICU
  • Parents speak English or Spanish AND
  • Positive PCR or culture verifying a viral infection
  • Not previously enrolled in the GEODESIC investigation

Exclusion Criteria:

  • Not expected to survive the PICU stay
  • Child has 'ward of the state' status

Study Plan

This section provides details of the study plan, including how the study is designed and what the study is measuring.

How is the study designed?

Design Details

Cohorts and Interventions

Group / Cohort
Intervention / Treatment
Suspected/documented bacterial sepsis
Patients have evidence of an acute bacterial infection with organ dysfunction
mRNA expression scores
Suspected/documented viral sepsis
Patients have evidence of an acute viral infection with organ dysfunction
mRNA expression scores
Infection negative systemic inflammation (SIRS)
Patients have no active infection but exhibit SIRS
mRNA expression scores

What is the study measuring?

Primary Outcome Measures

Outcome Measure
Measure Description
Time Frame
mRNA expression
Time Frame: At PICU admission and 48 hours later
SeptiCyte (various) gene expression scores
At PICU admission and 48 hours later

Collaborators and Investigators

This is where you will find people and organizations involved with this study.

Collaborators

Investigators

  • Principal Investigator: Jerry J Zimmerman, MD, PhD, Seattle Children's Research Center

Study record dates

These dates track the progress of study record and summary results submissions to ClinicalTrials.gov. Study records and reported results are reviewed by the National Library of Medicine (NLM) to make sure they meet specific quality control standards before being posted on the public website.

Study Major Dates

Study Start (Actual)

March 1, 2019

Primary Completion (Actual)

March 1, 2023

Study Completion (Actual)

March 1, 2023

Study Registration Dates

First Submitted

January 21, 2024

First Submitted That Met QC Criteria

January 21, 2024

First Posted (Actual)

January 30, 2024

Study Record Updates

Last Update Posted (Actual)

January 30, 2024

Last Update Submitted That Met QC Criteria

January 21, 2024

Last Verified

January 1, 2024

More Information

Terms related to this study

Other Study ID Numbers

  • STUDY00001733

This information was retrieved directly from the website clinicaltrials.gov without any changes. If you have any requests to change, remove or update your study details, please contact register@clinicaltrials.gov. As soon as a change is implemented on clinicaltrials.gov, this will be updated automatically on our website as well.

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