Analysis of the Dynamics of the Lung Microbiota During Acute Exacerbation of COPD Requiring Admission to Intensive Care Unit (ADMiRE)
Analysis of the Dynamics of the Lung Microbiota During Acute Exacerbation of COPD Requiring Admission to Intensive Care
Studie Overzicht
Toestand
Toestand
Conditie
Conditie
Interventie / Behandeling
Interventie / Behandeling
Gedetailleerde beschrijving
Chronic obstructive pulmonary disease (COPD) is a frequent cause of ICU admission. COPD exacerbations are a leading cause of lung function worsening and of morbimortality. Hospitalizations due to COPD exacerbations are highly expensive for health insurance system. Bacterial pulmonary microbiota has been shown to be correlated to the severity of COPD and to exacerbations. Nevertheless fungi and viruses which are full actors of pulmonary microbiota have not yet been investigated.
Our primary outcome will be the assessment of alpha and beta diversity dynamics of the whole pulmonary microbiota (bacteria, fungi and viruses) between COPD exacerbation and steady state.
This study will prospectively include 24 patients at ICU admission for COPD exacerbation with sputum sampling. Steady-state as defined during a 2 months-later visit will be studied with another sputum collection.
Studietype
Studietype
Inschrijving (Verwacht)
Inschrijving
Contacten en locaties
Studiecontact
Studiecontact
- Naam: Didier GRUSON, MD/PhD
- Telefoonnummer: +335 56 79 55 17
- E-mail: didier.gruson@chu-bordeaux.fr
Studie Contact Back-up
- Naam: Renaud PREVEL, MD MSc
- Telefoonnummer: +335 56 79 55 17
- E-mail: renaud.prevel@u-bordeaux.fr
Studie Locaties
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-
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Bordeaux, Frankrijk, 33000
- University Hospital, Bordeaux
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-
Deelname Criteria
Geschiktheidscriteria
Geschiktheidscriteria
Leeftijden die in aanmerking komen voor studie
Accepteert gezonde vrijwilligers
Geslachten die in aanmerking komen voor studie
Bemonsteringsmethode
Studie Bevolking
Beschrijving
Inclusion Criteria:
- Patient above 18 admitted in ICU
- Admitted for COPD exacerbation defined by sustained (> 2 days) worsening of respiratory symptoms considering Anthonisen's criteria with life-threatening condition.
- Needing mechanical ventilation (noninvasive ventilation or oro-tracheal intubation)
- COPD condition will be presumed according to patient's respiratory history or previous lung function testing
- Able to consent or with the patient's family consent
- Affiliated to a social insurance scheme
No inclusion Criteria:
- COPD patient admitted for another cause than respiratory failure
- person under tutorship or curatorship
- living further than 100 kilometers away from the ICU
- expected survival inferior to 1 week
Exclusion Criteria
- Lung function testing not consistent with COPD at steady-state visit
Studie plan
Hoe is de studie opgezet?
Ontwerpdetails
Aantal groepen / cohorten
Cohorten en interventies
Groep / CohortGroep / Cohort |
Interventie / BehandelingInterventie / Behandeling |
|---|---|
|
exacerbating COPD patients needing ICU admission
sputum collection
|
Analysis of Sputum collection
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Wat meet het onderzoek?
Primaire uitkomstmaten
Primaire uitkomstmaten
Uitkomstmaat |
Maatregel Beschrijving |
Tijdsspanne |
|---|---|---|
|
Number of differents types of cyto-bacteriological of sputum in Bacteriology
Tijdsspanne: Day 0
|
After extraction of the DNA and sequencing, the obtained sequences allow a taxonomic assignment of the microorganisms.
The number of different taxonomic groups and the number of sequences within each taxonomic group to evaluate the α diversity through the coefficient developed by Shannon and the β diversity
|
Day 0
|
|
Number of differents types of Cyto-bacteriological of sputum in Mycology
Tijdsspanne: Day 0
|
After extraction of the DNA and sequencing, the obtained sequences allow a taxonomic assignment of the microorganisms.
The number of different taxonomic groups and the number of sequences within each taxonomic group to evaluate the α diversity through the coefficient developed by Shannon and the β diversity.
|
Day 0
|
|
Number of differents types of Cyto-bacteriological of sputum in Virology
Tijdsspanne: Day 0
|
After extraction of the RNA and sequencing, the obtained sequences allow a taxonomic assignment of the microorganisms.
The number of different taxonomic groups and the number of sequences within each taxonomic group to evaluate the α diversity and the β diversity.
|
Day 0
|
|
Number of differents types of Cyto-bacteriological of sputum in Bacteriology
Tijdsspanne: Day 60
|
After extraction of the DNA and sequencing, the obtained sequences allow a taxonomic assignment of the microorganisms.
The number of different taxonomic groups and the number of sequences within each taxonomic group to evaluate the α diversity through the coefficient developed by Shannon and the β diversity
|
Day 60
|
|
Number of differents types of Cyto-bacteriological of sputum in Mycology
Tijdsspanne: Day 60
|
After extraction of the DNA and sequencing, the obtained sequences allow a taxonomic assignment of the microorganisms.
The number of different taxonomic groups and the number of sequences within each taxonomic group to evaluate the α diversity through the coefficient developed by Shannon.
|
Day 60
|
|
Number of differents types of Cyto-bacteriological of sputum in Virology
Tijdsspanne: Day 60
|
After extraction of the RNA and sequencing, the obtained sequences allow a taxonomic assignment of the microorganisms.
The number of different taxonomic groups and the number of sequences within each taxonomic group to evaluate the α diversity and the β diversity.
|
Day 60
|
Medewerkers en onderzoekers
Sponsor
Sponsor
Onderzoekers
Onderzoekers
- Hoofdonderzoeker: Didier GRUSON, MD/PhD, Hospital University, Bordeaux
Studie record data
Bestudeer belangrijke data
Studie start (Verwacht)
Studie start
Primaire voltooiing (Verwacht)
Primaire voltooiing
Studie voltooiing (Verwacht)
Studie voltooiing
Studieregistratiedata
Eerst ingediend
Eerst ingediend
Eerst ingediend dat voldeed aan de QC-criteria
Eerst ingediend dat voldeed aan de QC-criteria
Eerst geplaatst (Werkelijk)
Eerst geplaatst
Updates van studierecords
Laatste update geplaatst (Werkelijk)
Laatste update geplaatst
Laatste update ingediend die voldeed aan QC-criteria
Laatste update ingediend die voldeed aan QC-criteria
Laatst geverifieerd
Laatst geverifieerd
Meer informatie
Termen gerelateerd aan deze studie
Aanvullende relevante MeSH-voorwaarden
Andere studie-ID-nummers
Andere studie-ID-nummers
- CHUBX 2018/17
Informatie over medicijnen en apparaten, studiedocumenten
Bestudeert een door de Amerikaanse FDA gereguleerd geneesmiddel
Bestudeert een door de Amerikaanse FDA gereguleerd apparaatproduct
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