Spatial Analysis of Host-parasite Interactions in Cutaneous Leishmaniasis in Ethiopia (SpatialCL)
Spatial Analysis of Host-parasite Interactions in the Skin Across the Clinical Spectrum of Cutaneous Leishmaniasis in Ethiopia
Study Overview
Status
Status
Conditions
Conditions
Intervention / Treatment
Intervention / Treatment
Detailed Description
Specific objectives:
- To profile the full heterogeneity in skin and lesion immunity (single cell RNAseq), and the cellular microenvironment surrounding infected and non-infected macrophages (digital spatial profiling).
- To study the genomic diversity of L. aethiopica and identify features associated with the different clinical presentations (whole genome sequencing).
- To understand how parasites respond to the microenvironmental conditions and define parasite survival niches (digital spatial profiling).
- Study metabolic determinants of skin immunity (e.g. lipid metabolism, bioenergetics, short-chain fatty acids) in the context of key structural features of the skin landscape known to influence local metabolism and immune response (e.g. adipose tissue, follicles, microvasculature) (SpatialOMx).
- To investigate the association between patient outcomes and the above host/parasite factors at baseline.
Study Type
Study Type
Enrollment (Actual)
Enrollment
Contacts and Locations
Study Contact
Study Contact
- Name: Thao-Thy Pham, PhD
- Phone Number: +32474642614
- Email: thaothypham@itg.be
Study Contact Backup
- Name: Wim Adriaensen, PhD
- Phone Number: +32 494 75 53 60
- Email: wadriaensen@itg.be
Study Locations
-
-
Amhara
-
Gondar, Amhara, Ethiopia, 6200
- University of Gondar
-
-
Participation Criteria
Eligibility Criteria
Eligibility Criteria
Ages Eligible for Study
Accepts Healthy Volunteers
Sampling Method
Study Population
Description
Inclusion Criteria:
- Willing and able to provide informed consent
- Clinically confirmed CL diagnosis
- Between 12 and 50 years of age
Exclusion Criteria:
- Difficult or too painful sampling zone (see skin biopsy procedure below)
- (Primary) lesion size < 1 cm
- Already receiving CL treatment or received CL treatment in the last 3 months (excluding traditional medicine)
- Known major comorbidity at time of diagnosis (e.g. VL, HIV, TB, malaria, severe intestinal helminth infection)
- Medical history of VL
- Severely underweight (BMI<16)
- Known pregnancy
- Use of immunosuppressive medication in the last month
- Known excessive alcohol use (between >10 intakes/day and >10 intakes/week)
- History of hypersensitivity to local anaesthetics
- Presence of keloids/hypertrophic scars
Study Plan
How is the study designed?
Design Details
- Observational Models: Case-Control
- Time Perspectives: Prospective
Number of groups / cohorts
Cohorts and Interventions
Group / CohortGroup / Cohort |
Intervention / TreatmentIntervention / Treatment |
|---|---|
|
Local cutaneous leishmaniasis patients group (LCL)
local cutaneous leishmaniasis patients
|
4mm skin biopsy
venous blood sample to acquire plasma, PBMCs and whole blood
venous blood sample used for HLA typing
genome sequencing of parasite DNA that is extracted from the skin slit
|
|
Mucocutaneous leishmaniasis patients group (MCL)
mucocutaneous leishmaniasis patients
|
4mm skin biopsy
venous blood sample to acquire plasma, PBMCs and whole blood
venous blood sample used for HLA typing
genome sequencing of parasite DNA that is extracted from the skin slit
|
|
Diffuse cutaneous leishmaniasis patients group (DCL)
diffuse cutaneous leishmaniasis patients
|
4mm skin biopsy
venous blood sample to acquire plasma, PBMCs and whole blood
venous blood sample used for HLA typing
genome sequencing of parasite DNA that is extracted from the skin slit
|
|
Healthy control patients group Ethiopia (HC - Ethiopia)
healthy control patients undergoing elective surgery in Northern Ethiopia
|
4mm skin biopsy
|
|
Healthy control patients group Belgium (HC - Belgium)
healthy control patients undergoing plastic surgery in Belgium
|
4mm skin biopsy
|
What is the study measuring?
Primary Outcome Measures
Primary Outcome Measures
Outcome Measure |
Measure Description |
Time Frame |
|---|---|---|
|
Spatially resolved immunological characterization of the CL lesion using single cell RNA sequencing and digital spatial profiling
Time Frame: Day 0
|
Using single cell RNA sequencing and digital spatial profiling methods, we will profile the full heterogeneity in healthy skin/lesion immunity and the cellular microenvironment surrounding infected and non-infected macrophages, respectively.
|
Day 0
|
|
Genomic characterization of L. aethiopica using whole genome sequencing
Time Frame: Day 0
|
Whole genome sequencing will allow us to study the genomic diversity of L. aethiopica and identify features associated with the different clinical presentations.
|
Day 0
|
|
Defining microenvironment and parasite niches in CL lesions using digital spatial profiling
Time Frame: Day 0
|
The digital spatial profiling will indicate the different microenvironmental conditions and parasite survival niches.
|
Day 0
|
|
Spatially resolved determination of the metabolic profile of the CL lesion using spatial OMx
Time Frame: Day 0
|
The metabolic determinants of skin immunity (e.g.
lipid metabolism, bioenergetics, short-chain fatty acids) in the context of key structural features of the skin landscape known to influence local metabolism and immune response (e.g.
adipose tissue, follicles, microvasculature) will be studied by SpatialOMx.
|
Day 0
|
|
The association between host/parasite factors and patients after treatment using clinical parameters
Time Frame: Month 6
|
Patients are clinically assessed at day 0 (baseline visit), day 28 and month 6.
These clinical assessments include a medical questionnaire and lesion assessment, and are compared with the single cell RNA sequencing and spatial resolution data to define potential causal relations between patient outcomes and immunometabolic factors.
|
Month 6
|
Collaborators and Investigators
Sponsor
Sponsor
Collaborators
Collaborators
Investigators
Investigators
- Principal Investigator: Wim Adriaensen, PhD, Institute of Tropical Medicine Antwerp
- Principal Investigator: Mikias Woldetensay, MD, University of Gondar
Publications and helpful links
Helpful Links
Study record dates
Study Major Dates
Study Start (Actual)
Study Start
Primary Completion (Actual)
Primary Completion
Study Completion (Actual)
Study Completion
Study Registration Dates
First Submitted
First Submitted
First Submitted That Met QC Criteria
First Submitted That Met QC Criteria
First Posted (Actual)
First Posted
Study Record Updates
Last Update Posted (Actual)
Last Update Posted
Last Update Submitted That Met QC Criteria
Last Update Submitted That Met QC Criteria
Last Verified
Last Verified
More Information
Terms related to this study
Keywords
Additional Relevant MeSH Terms
Other Study ID Numbers
Other Study ID Numbers
- 1451/20
Plan for Individual participant data (IPD)
Plan to Share Individual Participant Data (IPD)?
IPD Plan Description
IPD Sharing Time Frame
IPD Sharing Access Criteria
IPD Sharing Supporting Information Type
- STUDY_PROTOCOL
- SAP
- ICF
Drug and device information, study documents
Studies a U.S. FDA-regulated drug product
Studies a U.S. FDA-regulated device product
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