Effects of Changing Intestinal Transit Time on Gut Microbial Composition and Metabolism (PRIMA-KOST)

March 14, 2025 updated by: Henrik Munch Roager, University of Copenhagen

Effects of Changing Intestinal Transit Time on Gut Microbial Composition and Metabolism During a Dietary Intervention with Low and High Fiber.

The aim of this study is to investigate how a short versus a long transit time impacts the gut microbiome's response to a high-fiber and a low-fiber diet, respectively. Such insights could help us understand personal responses to diets and be a first step towards personalized dietary recommendations targeting the gut microbiome.

Study Overview

Status

Completed

Detailed Description

The study consists of two parallel arms of whole-meal diets, a low-fiber diet, and a high-fiber diet, respectively. Each arm is designed as a cross-over where participants, in random order, are administered a laxative (Movicol) along with the provided diet to shorten their intestinal transit time or simply consume the provided whole-meal diet (control).

The two intervention periods both involve the following:

  • One week of run-in where participants consume the provided whole-meal diet.
  • One week where participants either consume Movicol with the provided whole-meal diet or simply continue consuming the provided whole-meal diet (control).

Both arms begin with a screening visit and one week where participants consume and record their habitual diets. Subsequently, the first intervention period follows with one visit before and after each of the two weeks (visit 1-3) followed by the second intervention period with one visit before and after each of the two weeks (visit 4-6). The two cross-over periods are split by a washout of at least two weeks.

The study thus runs for approximately 7-8 weeks depending on the length of the washout and consists of seven visits (one screening visit and six regular visits) in total.

Study Type

Interventional

Enrollment (Actual)

22

Phase

  • Not Applicable

Contacts and Locations

This section provides the contact details for those conducting the study, and information on where this study is being conducted.

Study Locations

      • Copenhagen, Denmark, 1958
        • University of Copenhagen, Department of Nutrition, Exercise and Sports

Participation Criteria

Researchers look for people who fit a certain description, called eligibility criteria. Some examples of these criteria are a person's general health condition or prior treatments.

Eligibility Criteria

Ages Eligible for Study

  • Adult
  • Older Adult

Accepts Healthy Volunteers

Yes

Description

Inclusion Criteria:

  • 18.5-30.0 kg/m2 BMI
  • Self-reported ≤3.5 spontaneous bowel movements per week
  • Willing to collect urine and stool samples at home and able to temporarily store them in their own freezer in a provided container.
  • Willing to eat the foods provided.
  • Owns a smartphone (iOS 11.0 and later or Android 5.0 and up) with access to the internet.

Exclusion Criteria:

  • Pregnant or lactating women.
  • Diagnosis of irritable bowel syndrome (IBS), small intestinal bacterial overgrowth (SIBO), inflammatory bowel diseases (IBD), Gastrointestinal obstruction, or Ischemic colitis
  • Diagnosed constipation according to the ROME IV criteria
  • Intake of antibiotics ˂ 1month, or any medication that can affect the outcomes of the study
  • Regular use of diarrhea inhibitors or laxatives
  • Dysphagia
  • Any chronic disease that can affect the outcomes of the study or pose a risk when consuming Movicol
  • Intake of medications potentially altering gastric pH (proton pump inhibitors, histamine receptor antagonists, antacids)
  • Intake of medications potentially altering the gastrointestinal motility (prokinetics, antiemetic agents, anti-cholinergic agents, narcotic analgetics, nonsteroidal anti-inflammatory drugs, and peroral glucocorticoids)
  • Concurrent participation in another trial
  • Any condition that makes the project responsible researcher to doubt the feasibility of the volunteer´s participation

Study Plan

This section provides details of the study plan, including how the study is designed and what the study is measuring.

How is the study designed?

Design Details

  • Primary Purpose: Basic Science
  • Allocation: Randomized
  • Interventional Model: Crossover Assignment
  • Masking: None (Open Label)

Arms and Interventions

Participant Group / Arm
Intervention / Treatment
Experimental: High-fiber diet
The high-fiber diet will consist of foods rich in dietary fiber such as coarse vegetables, wholegrain bread, and fruits representing a broad range of dietary fibers aiming for ≈40 g of fiber/10 MJ.
The participants will start by consuming one sacket of Movicol powder (13 g macrogol 3350) on the first day. On day 2, the participants will consume two sackets of Movicol powder (26 g macrogol 3350), one with breakfast in the morning and one before sleep in the evening. The participants will continue consuming two sackets per day (one morning, one evening) until the following study visit, day 8 (seven days in total). If the participants have a very loose stomach (recorded as Bristol stool scale ≥6), they will be instructed to reduce Movicol by one sacket/day. In case the participants have not passed a stool on day 2 or in the morning of day 3, the participants will increase the dose to a maximum of three sackets of Movicol powder (39 g macrogol 3350) per day (morning, noon, and evening) and continue this until the following study visit at day 8. If three sackets cause very loose stomach the participants will decrease the number of sackets consumed.
This is only a control and participants will not receive Movicol.
Other Names:
  • Control
Experimental: Low-fiber diet
The low-fiber diet will consist of foods poor in fiber such as white bread and refined foods aiming for ≈10 g of fiber/10 MJ.
The participants will start by consuming one sacket of Movicol powder (13 g macrogol 3350) on the first day. On day 2, the participants will consume two sackets of Movicol powder (26 g macrogol 3350), one with breakfast in the morning and one before sleep in the evening. The participants will continue consuming two sackets per day (one morning, one evening) until the following study visit, day 8 (seven days in total). If the participants have a very loose stomach (recorded as Bristol stool scale ≥6), they will be instructed to reduce Movicol by one sacket/day. In case the participants have not passed a stool on day 2 or in the morning of day 3, the participants will increase the dose to a maximum of three sackets of Movicol powder (39 g macrogol 3350) per day (morning, noon, and evening) and continue this until the following study visit at day 8. If three sackets cause very loose stomach the participants will decrease the number of sackets consumed.
This is only a control and participants will not receive Movicol.
Other Names:
  • Control

What is the study measuring?

Primary Outcome Measures

Outcome Measure
Measure Description
Time Frame
Fecal butyrate over urine p-cresol sulfate ratio
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in ratio between fecal butyrate (reflecting saccharolytic fermentation) and urine p-cresol sulfate (reflecting proteolytic fermentation) between interventions.
From visit 1 through to study completion, an average of 7 weeks

Secondary Outcome Measures

Outcome Measure
Measure Description
Time Frame
Whole gut transit time measured by sweet corn
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in whole gut transit time between interventions determined by the passage time of sweet corn.
From visit 1 through to study completion, an average of 7 weeks
Whole gut transit time measured by blue muffins
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in whole gut transit time between interventions determined by the passage time of muffins with blue dye.
From visit 1 through to study completion, an average of 7 weeks
Stool consistency
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in stool consistency determined by Bristol Stool Scale. The Bristol Stool Scale measures stool consistency on a scale from 1-7 with high numbers reflecting loose stool.
From visit 1 through to study completion, an average of 7 weeks
Change in bowel movement frequency
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in bowel movement frequency will be measured by the participants recording every bowel movement in a defecation diary during the study.
From visit 1 through to study completion, an average of 7 weeks
Fecal water content in percentage of stool weight
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Change in fecal water content between interventions.
From visit 1 through to study completion, an average of 7 weeks
Fecal concentration of short-chain fatty acids
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Change in concentration of short-chain fatty acids between interventions.
From visit 1 through to study completion, an average of 7 weeks
Fecal pH
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Change in fecal pH level between interventions.
From visit 1 through to study completion, an average of 7 weeks
Fecal ammonia concentration
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Change in ammonia content between interventions.
From visit 1 through to study completion, an average of 7 weeks
Concentration of fasting plasma short-chain fatty acids
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Change in concentration of short-chain fatty acids between interventions.
From visit 1 through to study completion, an average of 7 weeks
Fasting plasma concentrations of bile acids
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Change in concentration of bile acids in fasting blood between interventions.
From visit 1 through to study completion, an average of 7 weeks
Fasting breath methane and hydrogen levels in parts per million
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in fasting breath methane and hydrogen concentration measured in parts per million (PPM) in exhalations between interventions.
From visit 1 through to study completion, an average of 7 weeks
Microbial metabolites in urine from proteolytic fermentation as assessed by mass spectrometry
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in the urine concentration of metabolites of microbial proteolysis between interventions.
From visit 1 through to study completion, an average of 7 weeks
Microbial metabolites in blood from proteolytic fermentation as assessed by mass spectrometry
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in the blood concentration of metabolites of microbial proteolysis between interventions.
From visit 1 through to study completion, an average of 7 weeks
Fecal metabolome as assessed by untargeted metabolomics
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in the fecal metabolome between interventions.
From visit 1 through to study completion, an average of 7 weeks
Gut microbiome assessed by shotgun sequencing
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in gut microbiota composition between interventions.
From visit 1 through to study completion, an average of 7 weeks
Gut microbiome assessed by 16S amplicon sequencing
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in gut microbiota composition between interventions.
From visit 1 through to study completion, an average of 7 weeks

Other Outcome Measures

Outcome Measure
Measure Description
Time Frame
Urine metabolome as assessed by untargeted metabolomics
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in the urine metabolome between interventions.
From visit 1 through to study completion, an average of 7 weeks
Blood metabolome as assessed by untargeted metabolomics
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in the blood metabolome between interventions.
From visit 1 through to study completion, an average of 7 weeks
Fecal microbial metabolites of proteolytic fermentation measured by mass spectrometry
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Assessment of changes in fecal microbial metabolites of proteolytic fermentation (amino acid-derived metabolites).
From visit 1 through to study completion, an average of 7 weeks
Fecal enzymatic activities
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Assessment of changes in enzymatic activities measured in fecal samples between interventions.
From visit 1 through to study completion, an average of 7 weeks
Fecal residual carbohydrate concentration
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Change in residual carbohydrate concentration measured in fecal samples between interventions.
From visit 1 through to study completion, an average of 7 weeks
Fecal energy density
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Change in fecal energy density measured by bomb calorimetry in fecal samples between interventions.
From visit 1 through to study completion, an average of 7 weeks
Fecal redox potential measured in mV
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Change in redox potential measured in fecal samples between interventions.
From visit 1 through to study completion, an average of 7 weeks
Fecal carbon:nitrogen (C:N) ratio
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Change in C:N ratio measured in fecal samples between interventions.
From visit 1 through to study completion, an average of 7 weeks
Fecal microbial load (cells per gram)
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Change in microbial load in fecal samples between interventions.
From visit 1 through to study completion, an average of 7 weeks
Fecal calprotectin concentration
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Change in concentration of calprotectin measured in fecal samples between interventions. Used as a measure of intestinal inflammation.
From visit 1 through to study completion, an average of 7 weeks
Change in various markers related to glucose metabolism
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in the concentration of various standard markers of glucose metabolism in fasting blood samples between interventions.
From visit 1 through to study completion, an average of 7 weeks
Change in various markers related to lipid metabolism
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in concentration of various standard biochemical markers of lipid metabolism in fasting blood samples between interventions.
From visit 1 through to study completion, an average of 7 weeks
Change in various markers of inflammation
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Change in concentration of various inflammatory markers in fasting blood between interventions.
From visit 1 through to study completion, an average of 7 weeks
Change in various appetite hormones
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Change in concentration of various appetite hormones in fasting blood between interventions.
From visit 1 through to study completion, an average of 7 weeks
Urinary creatinine concentration
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Measurement of urinary levels of creatinine from spot urine samples between interventions.
From visit 1 through to study completion, an average of 7 weeks
Amylase gene copy number
Time Frame: At visit 1
Measurement of amylase gene copy numbers from blood samples at visit 1 to determine the phenotype of the participants.
At visit 1
Change in body weight
Time Frame: From baseline through to study completion, an average of 8 weeks
Change in body weight is measured using a calibrated digital scale to ensure/monitor weight stability throughout the study.
From baseline through to study completion, an average of 8 weeks
Measurement of breath hydrogen and methane profiles in parts per million (Area under the curve)
Time Frame: From baseline through to study completion, an average of 8 weeks
Measurement of the hydrogen and methane concentrations, in parts per million (PPM), in morning, noon, and evening breath exhalations every day during the study using a portable breath analyzer.
From baseline through to study completion, an average of 8 weeks
Habitual dietary intake
Time Frame: Before each intervention, 6 days in total
Habitual dietary intake will be measured two times over 3 days each using an online 24h dietary record MyFood24 prior to visit 1 and 4.
Before each intervention, 6 days in total
Change in self-perceived stress level
Time Frame: At visit 1 and after each intervention
Participants' stress levels will be assessed using Cohen's 10-item Perceived Stress Scale (PSS) at visits 1, 3, and 6. Each item is scored on a scale from 1-5 where higher values represent a higher level of self-perceived stress.
At visit 1 and after each intervention
Change in subjective gastrointestinal symptoms
Time Frame: From visit 1 through to study completion, an average of 7 weeks
Changes in subjective gastrointestinal symptoms reported by participants on a visual analog scale from 0 to 10, where 0 means no symptoms and 10 means the worst possible symptoms. The questionnaire includes the following symptoms: overall stomach and intestinal symptoms, stomachache, flatulence, bloating, constipation, and diarrhea.
From visit 1 through to study completion, an average of 7 weeks
Physical activity level
Time Frame: At baseline
Physical activity will be measured by the International Physical Activity Questionnaire short form (IPAQ-s) at the screening visit. The IPAQ-s consists of 7 items asking about the amount of physical activity (in minutes) at different intensities. The score is the sum of minutes of activity at each intensity level given as metabolic equivalents (METs). The higher the MET score, the more physically active the participant is.
At baseline
Change in sleep quality
Time Frame: At visit 1 and after each intervention
Changes in sleep pattern and quality will be measured by the Pittsburg Sleep Quality Index (PSQI) at visits 1, 3, and 6. The PSQI consists of 19 items, summed into seven component scores and one overall composite score. Each item is rated on a scale from 0-3 with lower scores reflecting healthier sleep quality.
At visit 1 and after each intervention

Collaborators and Investigators

This is where you will find people and organizations involved with this study.

Study record dates

These dates track the progress of study record and summary results submissions to ClinicalTrials.gov. Study records and reported results are reviewed by the National Library of Medicine (NLM) to make sure they meet specific quality control standards before being posted on the public website.

Study Major Dates

Study Start (Actual)

October 3, 2023

Primary Completion (Actual)

November 29, 2024

Study Completion (Actual)

November 29, 2024

Study Registration Dates

First Submitted

August 11, 2023

First Submitted That Met QC Criteria

August 28, 2023

First Posted (Actual)

September 1, 2023

Study Record Updates

Last Update Posted (Actual)

March 25, 2025

Last Update Submitted That Met QC Criteria

March 14, 2025

Last Verified

March 1, 2025

More Information

Terms related to this study

Additional Relevant MeSH Terms

Other Study ID Numbers

  • M245

Drug and device information, study documents

Studies a U.S. FDA-regulated drug product

No

Studies a U.S. FDA-regulated device product

No

product manufactured in and exported from the U.S.

No

This information was retrieved directly from the website clinicaltrials.gov without any changes. If you have any requests to change, remove or update your study details, please contact register@clinicaltrials.gov. As soon as a change is implemented on clinicaltrials.gov, this will be updated automatically on our website as well.

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