自身免疫和炎症患者的诊断、预后和治疗决策工具的概念 (ATRACTion)
The main objective of this study is to generate diagnosis and therapeutic-decision tools through the identification of molecular causes of PIDs with autoimmunity/inflammation and the variability in disease outcome at the transcriptional level using a combination of omics signatures (transcriptomics, epigenomics, proteomics, metagenomics, metabolomics and lipidomics).
研究概览
地位
条件
干预/治疗
详细说明
Primary Immune deficiencies (PIDs) are a group of monogenic diseases related to developmental or functional dysfunction of one or several immune cell types. Individually there are rare entities, but collectively they group several thousands of patients.
Approximately 500 000 patients suffer from PIDs worldwide, making their management a true health-care concern. According to European Society for Immunodeficiencies (ESID), the age group in which PIDs is most frequently diagnosed is under 19 years of age (62%)1. PIDs are causing susceptibility to severe and life-threatening infections by common pathogens, but they also predispose to cancer and can initially manifest as autoimmune and inflammatory diseases.
Multiple mechanisms underlie the development of autoimmunity/inflammation in PIDs. Moreover, their development can be influenced by the composition of the microbiota, which shapes host metabolic and immune functions and can be modified by many environmental factors. In the last two decades a particular emphasis was given to the elucidation of the genomic mutations causing PIDs. This led to a burst of genetic diagnosis as the numbers of known monogenic causes of PIDs rose from around 200 in 2010 to more than 310 in 2017. These genomic approaches revealed that: 1) a given monogenic defect can lead to very dissimilar clinical presentations, disproving the initial concept that a monogenic defect is associated with specific clinical manifestations ; and 2) the number of cases of autosomal dominant genetic deficiencies has increased, with sometimes a partial clinical penetrance so that some relatives carrying the causal genetic variant remain asymptomatic. Hence, onset and presentation of autoimmune and inflammatory diseases in PIDs is highly unpredictable.
PIDs with autoimmunity/inflammation usually require life-long symptomatic treatments including broad immunosuppression or immunotherapies. On the long term, such treatments can have important side effects or poor efficacy and they result in high burden cost. It is therefore crucial to diagnose PIDs as early as possible in order to select the most efficient therapy based not only on clinical features as it is nowadays, but to include the underlying molecular cause of immune dysregulation.
The central goal of this project is to explain the very variable outcome of monogenic autoimmune and inflammatory diseases and to define predictive biomarkers in order to stratify patients and to optimize therapeutic choices.
研究类型
注册 (实际的)
联系人和位置
学习地点
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-
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Paris、法国
- hôpital Necker Enfants Malades
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-
参与标准
资格标准
适合学习的年龄
接受健康志愿者
有资格学习的性别
取样方法
研究人群
Patients with PIDs and autoimmunity/inflammation related to known and unknown genetic defects (ALPS, Cytopenia, Enteropathy-IBD, pSLE, JIA, FHL, CA-EBV, CID) and their healthy relatives (controls) will be recruited in 2 clinical services of Necker hospital: Paediatric Rhumatology Immuno Hematology department Department, and paediatric Paediatric Gastroenterology department Department.
Unrelated controls will be recruited in the Paediatric Rhumatology Immuno Hematology Department, the Paediatric Gastroenterology Department,also be recruited in the Department of Paediatric Visceral and Urologic Surgery and the Department of Maxillofacial Surgery and Paediatric Plastic Surgery within patients hospitalised for a surgery and not affected by an immune-related disease or a cancer.
描述
Inclusion Criteria for controls (patients relatives and unrelated subjects):
- Individuals aged<18 y/o.
- Individuals > 6 kg
- Individuals not affected by an immune-related disease or not affected by cancer
- Individuals whose parents have signed an enlightened consent.
Inclusion criteria for patients
- Individuals with health insurance.
- Patients treated at Necker hospital with PIDs and autoimmunity/inflammation related to known genetic defects (cytopenia, Enteropathy Inflammatory bowel disease (IBD), Systemic Lupus Erythematosus (SLE), Juvenile Idiopathic Arthritis (JIA), Familial Hemophagocytic Lymphohistiocytosis (FHL), chronic EBV infection associated (Ca-EBV) with EBV-infected T and/or Natural Killer (NK) cells and with a high risk to develop macrophage activation syndrome similar to FHL. See table below for diagnosis inclusion criteria.
- Individuals aged<18 y/o.
- Individuals > 9 kg
- Patients whose parents have signed an enlightened consent.
Exclusion Criteria:
- Intake of antibiotics within 2 weeks prior inclusion
- Absence of parent's or child consent form
- Cytotoxic cancer treatments
- antiviral treatments (HIV, hepatitis …)
- Short term life-threatening conditions
- Individuals placed under judicial protection
学习计划
研究是如何设计的?
设计细节
- 观测模型:COHORT
- 时间观点:PROSPECTIVE
队列和干预
团体/队列 |
干预/治疗 |
|---|---|
|
Patients
based on the potential for inclusion of patient's cohort followed in Necker hospital with PIDs and poly-autoimmunity related to known genetic defects. Recruitments will be made at Pediatric Rheumatology Immuno Hematology department, and paediatric Gastroenterology department (n=250). Collection of blood, urine and stools at inclusion and blood at 12 months consultation/ follow-up. |
Blood, Urine and Stool samples will be collected from the participants. |
|
Patients' relatives (control)
Brothers or sisters of the patients (n=125). Collection of blood, urine and stools at inclusion. |
Blood, Urine and Stool samples will be collected from the participants. |
|
Patients with unrelated diseases (control)
Recruitments will be made at the Paediatric Gastroenterology Department, in the Department of Paediatric Visceral and Urologic Surgery and the Department of Maxillofacial Surgery and Paediatric Plastic Surgery at Necker's Hospital. Participants will be included if not diagnosed PIDs and poly-autoimmunity (n=125). Collection of blood, urine and stools. |
Blood, Urine and Stool samples will be collected from the participants. |
研究衡量的是什么?
主要结果指标
结果测量 |
措施说明 |
大体时间 |
|---|---|---|
|
Generate a diagnosis and therapeutic-decision tools
大体时间:5 years
|
Identification of molecular causes of PIDs with autoimmunity/inflammation and the variability in disease outcome at the transcriptional level using a combination of omics signatures (transcriptomic, epigenomics, proteomic, metagenomic, metabolomics and lipidomics). |
5 years
|
次要结果测量
结果测量 |
措施说明 |
大体时间 |
|---|---|---|
|
1- Development of an atlas of molecular interactions leading to autoimmunity and inflammation
大体时间:5 years
|
Research tool integrating transcriptomic, proteomic, epigenetic, metabolomic and lipidomics data of pediatric affected patients as well as healthy pediatric individuals This atlas will be available widely to the public and private research community. |
5 years
|
|
2 - To develop an artificial intelligent online application
大体时间:5 years
|
The decision support tool will be interoperable with any clinical information system and will be clinically validated. |
5 years
|
|
3- Ancillary study (pilot study)
大体时间:5 years
|
i. Validation of candidate biomarkers associated to diagnosis and prognosis of Juvenile Idiopathic Arthritis patients ; ii. Definition of a specific clinical outcome and early quantification of the performance of a diagnostic decision tool based on omics signatures (proof of concept) |
5 years
|
合作者和调查者
调查人员
- 首席研究员:Frédéric Rieux-Laucat、Institut Imagine
出版物和有用的链接
研究记录日期
研究主要日期
学习开始 (实际的)
初级完成 (实际的)
研究完成 (实际的)
研究注册日期
首次提交
首先提交符合 QC 标准的
首次发布 (实际的)
研究记录更新
最后更新发布 (实际的)
上次提交的符合 QC 标准的更新
最后验证
更多信息
与本研究相关的术语
其他相关的 MeSH 术语
- 血细胞减少症
- 内分泌系统疾病
- 肌肉骨骼疾病
- 病理过程
- 关节炎
- 关节疾病
- 风湿性疾病
- 先天性遗传病
- 代谢性疾病
- 结缔组织病
- 免疫系统疾病
- 消化系统疾病
- 出血
- 葡萄糖代谢紊乱
- 糖尿病
- 皮肤表现
- 血液病
- 肝病
- 免疫缺陷综合症
- 淋巴系统疾病
- 淋巴增生性疾病
- 免疫增生性疾病
- 血液凝固障碍
- 出血性疾病
- 血小板疾病
- 血栓性微血管病
- 肝炎,慢性
- 紫癜、血小板减少症
- 紫癜
- 组织细胞增生症,非朗格汉斯细胞
- 组织细胞增多症
- 肝炎
- 血小板减少症
- 先天性、遗传性和新生儿疾病和异常
- 病理状况、体征和症状
- 营养代谢疾病
- 皮肤和结缔组织疾病
- 体征和症状
- 半身和淋巴疾病
- 原发性免疫缺陷病
- 关节炎,青少年
- 系统性红斑狼疮
- 糖尿病,1 型
- 紫癜,血小板减少性,特发性
- 自身免疫性疾病
- 淋巴组织细胞增生症,噬血细胞
- 肝炎,自身免疫
- 自身免疫性淋巴增生综合征
- 多发性内分泌病,自身免疫
- 自身免疫性肠病
其他研究编号
- C20-59
计划个人参与者数据 (IPD)
计划共享个人参与者数据 (IPD)?
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