The Effect of Faecal Microbiota Transplantation (FMT) on Eradication of Multidrug Resistant Organisms (MRO) in Intestinal Carriers (FEMRO)

April 14, 2026 updated by: Andreas Munk Petersen, Hvidovre University Hospital

The Effect of Faecal Microbiota Transplantation (FMT) on Eradication of Multidrug Resistant Organisms (MRO) in Intestinal Carriers - a Multicentre, Randomized, Double-blinded and Placebo-controlled Study

The aim of this study is to investigate the effect of faecal microbiota transplantation (FMT) on eradication of multidrug resistant organisms (MRO) in the intestine. Ultimately, it would be possible to prevent invasive infections with MRO that are difficult to treat and require last-resort antibiotics. The investigators hypothesize that FMT induce intestinal resistance towards colonization with MRO e.g. Vancomycin resistant Enterococcus Faecium (VRE), carbapenemase-producing Enterobacterales (CPE) and extended-spectrum beta-lactamase producing Enterobacterales (ESBL-E).

Study Overview

Detailed Description

The study is designed as a randomized, double-blinded and placebo-controlled clinical trial. The participants (n = 80) will be randomized 1:1 to FMT or placebo. FMT or placebo consist of 25-30 capsules which need to be consumed on one day or alternatively consumed over three consecutive days, if one day is unacceptable to the participant. At baseline, eight weeks, and 16 weeks rectal swabs for PCR and culture will be taken. Regarding VRE and CPO, there are specific PCRs followed by confirmatory culture, whereas ESBL-E is detected by culture of rectal swab. Furthermore, participants will be asked to deliver faecal samples as well at baseline and 16 weeks post FMT to examine changes in the intestinal microbiome.

Study Type

Interventional

Enrollment (Actual)

83

Phase

  • Not Applicable

Contacts and Locations

This section provides the contact details for those conducting the study, and information on where this study is being conducted.

Study Locations

    • Copenhagen
      • Hvidovre, Copenhagen, Denmark, 2650
        • Hvidovre Hospital, Copenhagen University

Participation Criteria

Researchers look for people who fit a certain description, called eligibility criteria. Some examples of these criteria are a person's general health condition or prior treatments.

Eligibility Criteria

Ages Eligible for Study

18 years to 110 years (Adult, Older Adult)

Accepts Healthy Volunteers

No

Description

Inclusion Criteria:

  • Age: minimum 18 years
  • Positive rectal PCR and/or culture for MRO
  • Ability to speak and understand Danish or English
  • Capable of swallowing the capsules

Exclusion Criteria:

  • Current invasive infection with an MRO e.g. in abdomen, bloodstream or symptomatic urinary tract infection.
  • Severe immune deficiency (defined as current chemo treatment or neurofilocytes < 1000/mm3
  • Pancreatitis, defined by pancreatic amylases above the upper reference limit
  • Planned or recent abdominal surgery (within 14 days)
  • Parenteral nutrition
  • Current antibiotic treatment of the same MRO as intestinal carriage
  • Terminal disease with expected survival under three months
  • Sepsis defined according to Surviving Sepsis Campaign guidelines
  • Pregnant or lactating women

Study Plan

This section provides details of the study plan, including how the study is designed and what the study is measuring.

How is the study designed?

Design Details

  • Primary Purpose: Treatment
  • Allocation: Randomized
  • Interventional Model: Parallel Assignment
  • Masking: Triple

Arms and Interventions

Participant Group / Arm
Intervention / Treatment
Experimental: FMT (faecal microbiota transplantation)
25-30 capsules of faecal material.
25-30 capsules of faecal material
Placebo Comparator: Placebo
25-30 placebo capsules.
25-30 placebo capsules

What is the study measuring?

Primary Outcome Measures

Outcome Measure
Measure Description
Time Frame
Number of participants with MRO clearance
Time Frame: 8 weeks
Number of participants with MRO clearance after eight weeks. This will be measured on rectal samples that will undergo PCR/culture for ESBL, VRE and CPO. The results from the test will be positive or negative.
8 weeks

Secondary Outcome Measures

Outcome Measure
Measure Description
Time Frame
Number of participants with MRO clearance
Time Frame: 16 weeks
Number of participants with negative PCR for MRO on rectal swab and faecal culture negative for MRO after 16 weeks. This will be measured on rectal samples that will undergo PCR/culture for ESBL, VRE and CPO. The result from the test will be positive or negative
16 weeks
Number of participants with adverse events.
Time Frame: 8 weeks, 16 weeks and 6 months.
Number of participants with adverse events both severe and non-severe.
8 weeks, 16 weeks and 6 months.
Comparison of the frequency of invasive infections
Time Frame: 6 months
Comparison of the frequency of invasive infections with the same MRO as the intestinal carriage between the FMT and the placebo group.
6 months
Comparison of mortality rates, frequency of hospitalization and isolation between the FMT and the placebo group.
Time Frame: 6 months
Comparison of mortality rates, frequency of hospitalization and isolation between the FMT and the placebo group.
6 months
Comparison of changes in the diversity of the intestinal microbiome between the FMT group and the placebo group.
Time Frame: 8 weeks and 16 weeks
Comparison of changes in the diversity of the intestinal microbiome between the FMT group and the placebo group.
8 weeks and 16 weeks

Collaborators and Investigators

This is where you will find people and organizations involved with this study.

Study record dates

These dates track the progress of study record and summary results submissions to ClinicalTrials.gov. Study records and reported results are reviewed by the National Library of Medicine (NLM) to make sure they meet specific quality control standards before being posted on the public website.

Study Major Dates

Study Start (Actual)

March 24, 2023

Primary Completion (Actual)

February 11, 2025

Study Completion (Actual)

December 5, 2025

Study Registration Dates

First Submitted

February 3, 2023

First Submitted That Met QC Criteria

February 14, 2023

First Posted (Actual)

February 23, 2023

Study Record Updates

Last Update Posted (Actual)

April 17, 2026

Last Update Submitted That Met QC Criteria

April 14, 2026

Last Verified

April 1, 2026

More Information

Terms related to this study

Other Study ID Numbers

  • H-22040517

Drug and device information, study documents

Studies a U.S. FDA-regulated drug product

No

Studies a U.S. FDA-regulated device product

No

This information was retrieved directly from the website clinicaltrials.gov without any changes. If you have any requests to change, remove or update your study details, please contact register@clinicaltrials.gov. As soon as a change is implemented on clinicaltrials.gov, this will be updated automatically on our website as well.

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