- ICH GCP
- US Clinical Trials Registry
- Clinical Trial NCT01238250
Online Study of People Who Have Genetic Changes and Features of Autism: Simons Searchlight
Study Overview
Status
Conditions
- SMARCA4 Gene Mutation
- DDX3X
- 16P11.2 Deletion Syndrome
- 16p11.2 Duplications
- 1Q21.1 Deletion
- 1Q21.1 Microduplication Syndrome (Disorder)
- ACTL6B
- ADNP
- AHDC1
- ANK2
- ANKRD11
- ARID1B
- ASH1L
- BCL11A
- CHAMP1
- CHD2
- CHD8
- CSNK2A1
- CTBP1
- CTNNB1 Gene Mutation
- CUL3
- DNMT3A
- DSCAM
- DYRK1A
- FOXP1
- GRIN2A
- GRIN2B
- HIVEP2-Related Intellectual Disability
- HNRNPH2
- KATNAL2
- KDM5B
- KDM6B
- KMT2C Gene Mutation
- KMT2E
- KMT5B
- MBD5
- MED13L
- PACS1
- PPP2R5D-Related Intellectual Disability
- PTCHD1
- REST
- SCN2A Encephalopathy
- SETBP1 Gene Mutation
- SETD5
- SMARCC2
- STXBP1 Encephalopathy With Epilepsy
- SYNGAP1-Related Intellectual Disability
- TBR1
- ARHGEF9
- HNRNPU
- PPP3CA
- PPP2R1A
- SLC6A1
- 2p16.3 Deletions
- 5q35 Deletions
- 5q35 Duplications
- 7q11.23 Duplications
- 15Q13.3 Deletion Syndrome
- 16p11.2 Triplications
- 16P12.2 Microdeletion
- 16P13.11 Microdeletion Syndrome (Disorder)
- 17Q12 Microdeletion Syndrome (Disorder)
- 17Q12 Duplication Syndrome
- 17Q21.31 Deletion Syndrome
- 17q21.3 Duplications
- ACTB
- ADSL
- AFF2
- ALDH5A1
- ANK3
- ARX
- ATRX Gene Mutation
- AUTS2 Syndrome
- BCKDK
- BRSK2
- CACNA1C
- CAPRIN1
- CASK
- CASZ1
- CHD3
- CIC
- CNOT3
- CREBBP Gene Mutation
- CSDE1
- CTCF
- DEAF1
- DHCR7
- DLG4
- EBF3
- EHMT1
- EP300 Gene Mutation
- GIGYF1
- GRIN1
- GRIN2D
- IQSEC2-Related Syndromic Intellectual Disability
- IRF2BPL
- KANSL1
- KCNB1
- KDM3B
- NEXMIF
- KMT2A
- MBOAT7
- MEIS2
- MYT1L
- NAA15
- NBEA
- NCKAP1
- NIPBL
- NLGN2
- NLGN3
- NLGN4X
- NR4A2
- NRXN1
- NRXN2
- NSD1 Gene Mutation
- PHF21A
- PHF3
- PHIP
- POMGNT1
- PSMD12
- RELN
- RERE
- RFX3
- RIMS1
- RORB
- SCN1A
- SETD2 Gene Mutation
- SHANK2
- SIN3A
- SLC9A6
- SON
- SOX5
- SPAST
- SRCAP
- TAOK1
- TANC2
- TCF20
- TLK2
- TRIO
- TRIP12
- UPF3B
- USP9X
- VPS13B
- WAC
- WDFY3
- ZBTB20
- ZNF292
- ZNF462
- 2Q37 Deletion Syndrome
- 9q34 Duplications
- 15q15 Deletions
- 15Q24 Deletion
- NR3C2
- SYNCRIP
- 2q34 Duplication
- 2q37.3 Deletion
- 6q16 Deletion
- 15q11.2 BP1-BP2 Deletion
- 16p13.3 Deletion
- 17Q11.2 Microduplication Syndrome (Disorder)
- 17p13.3
- Xq28 Duplication
- CLCN4
- CSNK2B
- DYNC1H1
- EIF3F
- GNB1
- MED13
- MEF2C
- RALGAPB
- SCN1B
- YY1
- Xp11.22 Duplication
- PACS2
- MAOA
- MAOB
- HNRNPC
- HNRNPD
- HNRNPK
- HNRNPR
- HNRNPUL2
- 5P Deletion Syndrome
- TCF7L2 Gene Mutation
- HECW2
Detailed Description
Simons Searchlight has expanded over the last several years to include additional gene changes and participation through remote formats, either online or by phone. This allows English and Spanish-speaking families from across the world to participate at times that are convenient to their schedule. Participants can donate blood, saliva, or both. These samples are then linked to medical, behavioral, learning, and developmental data in order to understand the effects of specific gene changes.
Information provided by participants will be stripped of any personal identifying information and made available to qualified scientists around the world.
The Simons Foundation, a New York-based private foundation, is committed to finding science-based solutions and working towards the development of targeted treatments to improve the lives of people who have genetic and developmental differences.
Study Type
Enrollment (Estimated)
Contacts and Locations
Study Contact
- Name: Simons Searchlight Study Coordinator
- Phone Number: 855-329-5638
- Email: coordinator@SimonsSearchlight.org
Study Locations
-
-
Massachusetts
-
Boston, Massachusetts, United States, 02115
- Recruiting
- Boston Children's Hospital
-
Contact:
- Wendy Chung, MD PhD
- Phone Number: 855-329-5638
-
-
Pennsylvania
-
Lewisburg, Pennsylvania, United States, 17837
- Recruiting
- Geisinger Health System
-
Contact:
- Cora Taylor, PhD
- Phone Number: 855-329-5638
-
-
Participation Criteria
Eligibility Criteria
Ages Eligible for Study
- Child
- Adult
- Older Adult
Accepts Healthy Volunteers
Sampling Method
Study Population
The study continues to enroll and collect data from people who have the copy number variants, also called CNVs, and gene changes, specified above. Data is also collected from matched sibling control subjects and parents.
This study has already collected data on approximately 7,000 participants, including approximately 4,000 carriers. Participants include people who have a gene change and at least one parent or guardian. Participants can also include multiple people who have a gene change and are within the same family. Study aims to enroll up to 100,000 participants.
Description
Inclusion Criteria:
- Subjects of any age with a genetic condition on our eligible list along with their biological family members. Current list can be found at: https://www.simonssearchlight.org/research/what-we-study/
- Must be fluent in English or a supported language. Current supported languages are Spanish, French, and Dutch, with more to come.
- Able to register and participate through our online platform, which can be accessed through any device able to connect to the internet.
- Able and willing to provide consent.
Exclusion Criteria:
-Some genetic changes that we study have regions or variants that are not eligible for our research. This is determined during our laboratory review that is completed by trained and certified genetic counselors. These specific ineligible regions or variants can change frequently.
Study Plan
How is the study designed?
Design Details
- Observational Models: Family-Based
- Time Perspectives: Prospective
Cohorts and Interventions
Group / Cohort |
|---|
|
Copy Number Variants
Individuals with documented pathogenic or likely pathogenic copy number variants related to neurodevelopmental disorders.
|
|
Gene Variants
Individuals with documented pathogenic or likely pathogenic variants in a gene related to neurodevelopmental disorders.
|
What is the study measuring?
Primary Outcome Measures
Outcome Measure |
Measure Description |
Time Frame |
|---|---|---|
|
Baseline comprehensive collection of medical, behavioral, learning, and developmental information of people who have documented gene changes that are associated with features of autism and other neurodevelopmental disorders.
Time Frame: Baseline data is collected over the course of one month, on average.
|
Families with people who have specific documented gene changes that are associated with features of autism and other neurodevelopmental disorders will report detailed medical and family history information by phone.
Online research surveys will be used to collect information about behavioral and learning characteristics, with the goal of improving clinical care and treatment for these people.
|
Baseline data is collected over the course of one month, on average.
|
Secondary Outcome Measures
Outcome Measure |
Measure Description |
Time Frame |
|---|---|---|
|
Longitudinal, or long-term, comprehensive collection of medical, behavioral, learning, and developmental information from people who have documented gene changes that are associated with features of autism and other neurodevelopmental disorders.
Time Frame: Repeat data collection will occur on a regular basis and will be obtained over the course of one month, on average
|
To monitor and document the development of people who have gene changes that are related to autism and other neurodevelopmental disorders, online research surveys and updates to the family and medical history will be collected on an annual basis.
|
Repeat data collection will occur on a regular basis and will be obtained over the course of one month, on average
|
Collaborators and Investigators
Sponsor
Investigators
- Principal Investigator: Cora Taylor, PhD, Geisinger Clinic
- Principal Investigator: Wendy Chung, MD PhD, Boston Children's Hospital
Publications and helpful links
General Publications
- Weiss LA, Shen Y, Korn JM, Arking DE, Miller DT, Fossdal R, Saemundsen E, Stefansson H, Ferreira MA, Green T, Platt OS, Ruderfer DM, Walsh CA, Altshuler D, Chakravarti A, Tanzi RE, Stefansson K, Santangelo SL, Gusella JF, Sklar P, Wu BL, Daly MJ; Autism Consortium. Association between microdeletion and microduplication at 16p11.2 and autism. N Engl J Med. 2008 Feb 14;358(7):667-75. doi: 10.1056/NEJMoa075974. Epub 2008 Jan 9.
- Simons Vip Consortium. Simons Variation in Individuals Project (Simons VIP): a genetics-first approach to studying autism spectrum and related neurodevelopmental disorders. Neuron. 2012 Mar 22;73(6):1063-7. doi: 10.1016/j.neuron.2012.02.014. Epub 2012 Mar 21.
- Moreno-De-Luca A, Evans DW, Boomer KB, Hanson E, Bernier R, Goin-Kochel RP, Myers SM, Challman TD, Moreno-De-Luca D, Slane MM, Hare AE, Chung WK, Spiro JE, Faucett WA, Martin CL, Ledbetter DH. The role of parental cognitive, behavioral, and motor profiles in clinical variability in individuals with chromosome 16p11.2 deletions. JAMA Psychiatry. 2015 Feb;72(2):119-26. doi: 10.1001/jamapsychiatry.2014.2147.
- Zufferey F, Sherr EH, Beckmann ND, Hanson E, Maillard AM, Hippolyte L, Mace A, Ferrari C, Kutalik Z, Andrieux J, Aylward E, Barker M, Bernier R, Bouquillon S, Conus P, Delobel B, Faucett WA, Goin-Kochel RP, Grant E, Harewood L, Hunter JV, Lebon S, Ledbetter DH, Martin CL, Mannik K, Martinet D, Mukherjee P, Ramocki MB, Spence SJ, Steinman KJ, Tjernagel J, Spiro JE, Reymond A, Beckmann JS, Chung WK, Jacquemont S; Simons VIP Consortium; 16p11.2 European Consortium. A 600 kb deletion syndrome at 16p11.2 leads to energy imbalance and neuropsychiatric disorders. J Med Genet. 2012 Oct;49(10):660-8. doi: 10.1136/jmedgenet-2012-101203.
Study record dates
Study Major Dates
Study Start
Primary Completion (Estimated)
Study Completion (Estimated)
Study Registration Dates
First Submitted
First Submitted That Met QC Criteria
First Posted (Estimated)
Study Record Updates
Last Update Posted (Actual)
Last Update Submitted That Met QC Criteria
Last Verified
More Information
Terms related to this study
Keywords
- SMARCA4
- CTNNB1
- genetic mutation
- DDX3X
- 16p11.2
- 16p11.2 del
- 16p11.2 deletion
- 16p11.2 dup
- 16p11.2 duplication
- chromosome 16
- chromosome 16p
- chromosome 16p11
- chromosome 16p11.2
- 1q21.1
- 1q21.1 del
- 1q21.1 deletion
- 1q21.1 dup
- 1q21.1 duplication
- chromosome 1
- chromosome 1q
- chromosome 1q21
- chromosome 1q21.1
- genetic variant
- gene variant
- ADNP
- ANKRD11
- ARID1B
- ASXL3
- ACTL6B
- AHDC1
- BAF190
- ANK2
- ASH1L
- BCL11A
- CHD2
- CHD8
- CUL3
- DYRK1A
- FOXP1
- GRIN2B
- KDM6B
- KMT2E
- MBD5
- MED13L
- REST
- SCN2A
- SMARCC2
- SYNGAP1
- HIVEP2
- HNRNPH2
- PPP2R5D
- CHAMP1
- CSNK2A1
- CTBP1
- DNMT3A
- DSCAM
- GRIN2A
- KATNAL2
- KDM5B
- KMT2C
- KMT5B
- SUV420H1
- PACS1
- PTCHD1
- SETBP1
- SETD5
- STXBP1
- TBR1
- ARHGEF9
- HNRNPU
- PPP2B
- PPP2R1A
- SLC6A1
- PACS2
- MAOA
- MAOB
- HNRNPD
- HNRNPK
- HNRNPR
- TCF7L2
- HNRNPC
- HNRNPUL2
- 5P Deletion Syndrome
- HECW2
Additional Relevant MeSH Terms
- Neurologic Manifestations
- Central Nervous System Diseases
- Nervous System Diseases
- Mental Disorders
- Pathologic Processes
- Genetic Diseases, Inborn
- Disease
- Neurobehavioral Manifestations
- Congenital Abnormalities
- Neurodevelopmental Disorders
- Abnormalities, Multiple
- Chromosome Disorders
- Syndrome
- Intellectual Disability
- Brain Diseases
- Cri-du-Chat Syndrome
Other Study ID Numbers
- 2023-1257
- Simons Searchlight (Other Identifier: Simons Foundation)
- Simons VIP (Other Identifier: Simons Foundation)
- Simons VIP Connect (Other Identifier: Simons Foundation)
Plan for Individual participant data (IPD)
Plan to Share Individual Participant Data (IPD)?
IPD Plan Description
Drug and device information, study documents
product manufactured in and exported from the U.S.
This information was retrieved directly from the website clinicaltrials.gov without any changes. If you have any requests to change, remove or update your study details, please contact register@clinicaltrials.gov. As soon as a change is implemented on clinicaltrials.gov, this will be updated automatically on our website as well.
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