- ICH GCP
- US Clinical Trials Registry
- Clinical Trial NCT06475547
Inflammation and Postoperative Atrial Fibrillation in Cardiac Surgery
Study Overview
Status
Conditions
Intervention / Treatment
Detailed Description
Postoperative Atrial Fibrillation (POAF) after Cardiac Surgery Postoperative atrial fibrillation is a common complication following cardiac surgery, characterized by irregular and often rapid heart rate. It is associated with increased morbidity, prolonged hospital stays, and higher healthcare costs. The pathophysiology of POAF is complex and multifactorial, involving atrial structural and electrical remodeling, inflammation, and autonomic dysregulation.
Inflammation and Epicardial Fat Inflammation plays a significant role in the development of POAF. Surgical trauma and cardiopulmonary bypass trigger a systemic inflammatory response, releasing cytokines and other inflammatory mediators. Epicardial fat, the visceral fat depot around the heart, is an active endocrine organ secreting pro-inflammatory cytokines and adipokines. Increased epicardial fat thickness is associated with higher levels of inflammation and has been implicated in the pathogenesis of atrial fibrillation.
RNA isolation and sequencing RNA sequencing (RNA-seq) can be used to investigate gene expression in epicardial fat in several impactful ways. RNA-seq can profile gene expression to identify active genes in epicardial fat and their expression levels, revealing key genes involved in inflammation and metabolism. By comparing gene expression between groups, such as patients with and without POAF, RNA-seq can identify differentially expressed genes associated with atrial fibrillation.
RNA-seq analyses The RNA sequencing data files were aligned to the hg38 reference genome using the Spliced Transcripts Alignment to a Reference (STAR) aligner and read counts in genes were quantified. The resulting data matrix with unnormalized counts was loaded into RStudio together with patient metadata information (e.g., age, gender, BMI, smoking). Differential expression analyses were conducted with DESeq2 using adjustment for different variables, including type of tissue, age of patients, gender, and BMI.
Hypothesis We hypothesize that POAF may be influenced by pre-existing inflammation in epicardial fat, in addition to the inflammation caused by surgical trauma.
Objective:
To compare inflammatory gene expression in epicardial fat between patients who develop POAF and those who do not after elective cardiac surgery.
Study Design:
A prospective cohort study including patients undergoing first-time elective cardiac surgery.
Participants:
Inclusion criteria: Patients undergoing first-time elective cardiac surgery. Exclusion criteria: Patients with previous cardiac surgeries or emergency surgeries.
Groups:
POAF Group: Patients who develop POAF. Non-POAF Group: Patients who do not develop POAF.
Sample Collection:
Epicardial fat samples will be collected during the time of surgery.
RNA Isolation and Sequencing:
Homogenize adipose tissue in TRIzol using ceramic beads (Fastprep 24, MPBio). Purify RNA using EconoSpin columns (Epoch). Prepare RNA libraries with NEBNext Ultra II RNA Library Prep Kit for Illumina. Perform paired-end sequencing on the NovaSeq 6000 platform (Illumina).
Data Analysis:
Align RNA-seq data to the hg38 genome using STAR aligner. Quantify gene counts and perform differential expression analysis using DESeq2. Adjust for variables such as tissue type, age, gender, and BMI.
Outcome Measures:
Compare inflammatory gene expression profiles between POAF and Non-POAF groups at the time of surgery.
Study Type
Enrollment (Estimated)
Contacts and Locations
Study Contact
- Name: Lytfi Krasniqi, MD
- Phone Number: 65412404
- Email: Lytfi.Krasniqi@rsyd.dk
Study Locations
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-
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Odense, Denmark, 5000
- Recruiting
- Odense University Hospital, Cardiac Surgery Department
-
Contact:
- Lytfi Krasniqi, MD
- Phone Number: 004524638899
- Email: Lytfi.Krasniqi@rsyd.dk
-
-
Participation Criteria
Eligibility Criteria
Ages Eligible for Study
- Adult
- Older Adult
Accepts Healthy Volunteers
Sampling Method
Study Population
Description
Inclusion Criteria:
- Age > 18
- Informed consent
Exclusion Criteria:
- Incompetent individuals
- General poor health condition at the time of inclusion
- Reoperation
Study Plan
How is the study designed?
Design Details
Cohorts and Interventions
Group / Cohort |
Intervention / Treatment |
---|---|
POAF
Patients who develop postoperative atrial fibrillation.
|
This study is observational and does not involve any clinical intervention.
The primary procedure involves the collection of epicardial fat tissue samples.
The collected samples are then processed and analyzed to compare inflammatory gene expression between the two groups.
The analysis includes RNA sequencing to identify differentially expressed genes associated with atrial fibrillation and inflammation.
|
Non-POAF
Patients who do not develop postoperative atrial fibrillation.
|
What is the study measuring?
Primary Outcome Measures
Outcome Measure |
Measure Description |
Time Frame |
---|---|---|
Inflammatory genes
Time Frame: The sample is taken at the time of surgery.
|
Genes including Interleukin 6
|
The sample is taken at the time of surgery.
|
Collaborators and Investigators
Sponsor
Publications and helpful links
General Publications
- Wong CX, Ganesan AN, Selvanayagam JB. Epicardial fat and atrial fibrillation: current evidence, potential mechanisms, clinical implications, and future directions. Eur Heart J. 2017 May 1;38(17):1294-1302. doi: 10.1093/eurheartj/ehw045.
- Dobin A, Davis CA, Schlesinger F, Drenkow J, Zaleski C, Jha S, Batut P, Chaisson M, Gingeras TR. STAR: ultrafast universal RNA-seq aligner. Bioinformatics. 2013 Jan 1;29(1):15-21. doi: 10.1093/bioinformatics/bts635. Epub 2012 Oct 25.
- Love MI, Huber W, Anders S. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol. 2014;15(12):550. doi: 10.1186/s13059-014-0550-8.
Study record dates
Study Major Dates
Study Start (Actual)
Primary Completion (Estimated)
Study Completion (Estimated)
Study Registration Dates
First Submitted
First Submitted That Met QC Criteria
First Posted (Actual)
Study Record Updates
Last Update Posted (Actual)
Last Update Submitted That Met QC Criteria
Last Verified
More Information
Terms related to this study
Additional Relevant MeSH Terms
Other Study ID Numbers
- POAF130624
Plan for Individual participant data (IPD)
Plan to Share Individual Participant Data (IPD)?
IPD Plan Description
Data will be available in anonymized form in accordance with GDPR upon reasonable request.
Data will be shared with researchers whose proposed use has been approved, primarily for replication of our results.
IPD Sharing Time Frame
IPD Sharing Access Criteria
IPD Sharing Supporting Information Type
- STUDY_PROTOCOL
- SAP
- ICF
- ANALYTIC_CODE
- CSR
Drug and device information, study documents
Studies a U.S. FDA-regulated drug product
Studies a U.S. FDA-regulated device product
This information was retrieved directly from the website clinicaltrials.gov without any changes. If you have any requests to change, remove or update your study details, please contact register@clinicaltrials.gov. As soon as a change is implemented on clinicaltrials.gov, this will be updated automatically on our website as well.
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